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NECEvent2014_5_2_scaffold_9_29

Organism: NECEvent2014_5_2_Clostridium_paraputrificum-rel_30_55

near complete RP 49 / 55 MC: 1 BSCG 51 / 51 ASCG 15 / 38 MC: 2
Location: comp(32297..33001)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulatory protein n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CD52_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 56.3
  • Coverage: 229.0
  • Bit_score: 257
  • Evalue 1.00e-65
Transcriptional regulatory protein {ECO:0000256|PIRNR:PIRNR006171}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagofo similarity UNIPROT
DB: UniProtKB
  • Identity: 56.3
  • Coverage: 229.0
  • Bit_score: 257
  • Evalue 1.50e-65
malR3; transcriptional regulatory protein MalR similarity KEGG
DB: KEGG
  • Identity: 47.8
  • Coverage: 232.0
  • Bit_score: 219
  • Evalue 1.20e-54

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Taxonomy

Clostridium sartagoforme → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 705
ATGATAAAAGTTATGATTATTGAAGATGATCCTATGGTTAGGTCTATAAATATTCAATTTTTAAATAAGGTAGAAGGTATTAAGCTTGTAAAAGAATGTGGAAGAATAGAAGAAGCTAAAAAGGCTATCATAGAATTAAAAAATCAGATAGATTTAGTTTTAATTGATATTTTCCTACCTGATGGGAATGGTATAGATTTTCTAAAGTGGACAAGAAATGAGAACATAACAGTAGATGCAATTTTAATTACCGCAGATAGAAGTAAAGAGGCAGTAAGAGATGCATTTAAGTATGGAGCTATGGATTATTTAATTAAGCCCTTTAGATTTGATAGACTTAAGGAAGCTTTAGAGAAGTATAGGACCATTAAGAAGGAGCTCTATGCTATGGATGAGTTAGACCAAGAGCATATAGATAGTTTTATGCTTAGCAAAACTACAAAGTGTAGTGAATCATCTATGCCTAAGGGGATAAATATTAAAACCTATGAAAGTATTATTAATTTTCTCTATGAGAATCCAAATGAAAAATTAACTTCTGAAGAAATTGCTGATAAAATAGGACTTTCAAGAGTTACAGTAAGAAGATATTTAGAGAAGTTATATGAGGAAAACAAGGTAGATAAGATTTGTGAATATGGAAAGATAGGAAGACCTACTAATTATTATATGTTATTAAATTCATGAACAAAATGAACAAAATAA
PROTEIN sequence
Length: 235
MIKVMIIEDDPMVRSINIQFLNKVEGIKLVKECGRIEEAKKAIIELKNQIDLVLIDIFLPDGNGIDFLKWTRNENITVDAILITADRSKEAVRDAFKYGAMDYLIKPFRFDRLKEALEKYRTIKKELYAMDELDQEHIDSFMLSKTTKCSESSMPKGINIKTYESIINFLYENPNEKLTSEEIADKIGLSRVTVRRYLEKLYEENKVDKICEYGKIGRPTNYYMLLNS*TK*TK*