ggKbase home page

NECEvent2014_5_2_scaffold_2349_1

Organism: NECEvent2014_5_2_Clostridium_paraputrificum-rel_30_55

near complete RP 49 / 55 MC: 1 BSCG 51 / 51 ASCG 15 / 38 MC: 2
Location: 42..1337

Top 3 Functional Annotations

Value Algorithm Source
PTS system, lactose/cellobiose family IIC component n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HCE7_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 82.8
  • Coverage: 429.0
  • Bit_score: 728
  • Evalue 5.00e-207
  • rbh
Permease IIC component {ECO:0000256|PIRNR:PIRNR006351}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.8
  • Coverage: 429.0
  • Bit_score: 728
  • Evalue 7.00e-207
celB; PTS system cellobiose-specific transporter subunit IIC similarity KEGG
DB: KEGG
  • Identity: 64.2
  • Coverage: 430.0
  • Bit_score: 564
  • Evalue 2.10e-158

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Clostridium sp. 7_2_43FAA → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1296
ATGAAAAATTTAAGTGAATTTTTAGAAGAAAAGTTGATGCCTATAGCATCAAAATTAGGCTCAAACAAAGTGCTTATTTCAATACGTGATGGTATTACATTAAGCATGCCTTTAATTATCATTGGTTCTTTATTTATGATTATAGCAAGTTTTCCAGTAAAGGCTTGGACTGATTGGTTAACAGCTGTAGGTGTTGATGCTTATTTATGGAAGGGCGTTGATAGTAGTTTTGGATTAATGGGATTAGTTGCAAGTTTTGGTATTGCTAATAGCTTAGCACGTCAATATGATGTTGATGGTGTTTCAGCAGGAATTATATCTCTTTCTTCTTTTGTTGTTGTAACACCTTTTGTAAGTGGTGAAGCAGGAGCAGGAATCCCAGTAGGATTTATGGGAAGTAAAGGTTTATTTGTAGCTATGATAGTGGGTATTATTTCATCTTTAATTTTTAAGTGGTTTATTAAAAAGGATATACAAATAAAGTTACCAGATGCAGTTCCACCTGCAGTTGCAAGAAGTTTTAGTGCCTTAATTCCAGGTGCAGTTATTATAACGTTATGGTTAGTTGTTCTTGGAATTATGGATAAAGCTAGTATTGGAAATATACATGATTTACTTTTAAAGGTTTTAGGAGGTCCATTAGGATTACTTGGTAACAATATTTTTGGAACAATTATTGCAGTATTCTTAAATAGTTTATTCTGGATGGTTGGTATTCATGGTGGTAATATTGTAAATAGTATTCTTAAGCCAATTTGGCTTATGAATTCAGATGCAAACCGTCTAATATTCCAGGCTGATGCTACTGCAAAATTACCTAATATTATTACAGAGCCATTTATGGATAACTTTGTATATATCGGTGGTGGGGGAGCTACATTAGGTTTAGTAATAGTTATTGCTATTGTAGCAAGACGTAAGAGAGCTAGCCAAATTAGTAAGATGATGGCACCTTTAACATTAACACCTGGTATCTTCAATATTAATGAGCCAGCTATGTTTGGATTACCAATAGTAATGAATTTCTCTTTATTGATACCATTTGTTTTAGCACCAATAGCTAATGCAGTAATTTCATATACAGCAATGGCTTCGGGATTAGTTGCTACTACCACAGGTATTGCTGTTTCATGGACAATGCCACCAATTATTAGTGGATTCCTTACAACTGGAGGACATATAAGCGGTTCTATTTTACAAATAGTATTAATACTTGTTGATATAGCAATTTATTGGTTCTTCTATCAAAGTGTTGAAAAGAAGAATTTAGAATTAGAAGCAGCTGAAATAAATTAA
PROTEIN sequence
Length: 432
MKNLSEFLEEKLMPIASKLGSNKVLISIRDGITLSMPLIIIGSLFMIIASFPVKAWTDWLTAVGVDAYLWKGVDSSFGLMGLVASFGIANSLARQYDVDGVSAGIISLSSFVVVTPFVSGEAGAGIPVGFMGSKGLFVAMIVGIISSLIFKWFIKKDIQIKLPDAVPPAVARSFSALIPGAVIITLWLVVLGIMDKASIGNIHDLLLKVLGGPLGLLGNNIFGTIIAVFLNSLFWMVGIHGGNIVNSILKPIWLMNSDANRLIFQADATAKLPNIITEPFMDNFVYIGGGGATLGLVIVIAIVARRKRASQISKMMAPLTLTPGIFNINEPAMFGLPIVMNFSLLIPFVLAPIANAVISYTAMASGLVATTTGIAVSWTMPPIISGFLTTGGHISGSILQIVLILVDIAIYWFFYQSVEKKNLELEAAEIN*