ggKbase home page

NECEvent2014_5_2_scaffold_2952_1

Organism: NECEvent2014_5_2_Campylobacter_ureolyticus-rel_30_5_partial

partial RP 33 / 55 BSCG 23 / 51 ASCG 6 / 38 MC: 1
Location: 1..1956

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase similarity UNIPROT
DB: UniProtKB
  • Identity: 98.8
  • Coverage: 652.0
  • Bit_score: 1265
  • Evalue 0.0
rpoC; DNA-directed RNA polymerase, beta' subunit (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 84.5
  • Coverage: 656.0
  • Bit_score: 1112
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta'''' n=1 Tax=Campylobacter ureolyticus RepID=UPI000368C049 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 652.0
  • Bit_score: 1274
  • Evalue 0.0
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Campylobacter ureolyticus → Campylobacter → Campylobacterales → Epsilonproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1956
GATCTATATAGAAGAGTAATAAATAGAAATACAAGACTTAAAAGACTTTTAGAGCTTGACGCTCCTGAAATAATTATAAGAAATGAAAAAAGAATGCTTCAAGAAGCAGTTGATGCTCTTTTTGATAACGGAAGACGCGCAAATGCTGTAAAAGGAGCAAACAAAAGACCTTTAAAATCTTTAAGTGAAATTATAAAAGGAAAGCAAGGAAGATTTCGTCAAAATCTACTTGGAAAAAGGGTTGATTTTTCAGGTCGTTCAGTTATTGTTATTGGGCCAAATTTAAAAATGGATCAATGTGGTCTACCAAAAACTATGGCACTAGAACTTTTTAAGCCACATTTAATTGCAAGACTTCAAGAAAAAGGCTATGCTGCAACTGTAAAACAAGCTAAAAAAATGCTTGATGATAAAGCAGTTGAGGTTTGGGAATGTTTAGAAGAAGTTGTTAAAAACTATCCTATTATGTTAAACCGTGCTCCAACACTTCACAAAATGTCAATTCAAGCCTTTCACCCAGTATTGGTTGATGGAAAAGCGATAAAGCTTCACCCACTTGTTTGTGCTGCTTTTAACGCTGACTTTGATGGAGATCAAATGGCTGTTCACGTGCCACTTTCTCAAGAAGCCATCGCAGAATGTAAAGTTTTAATGCTAAGCTCAATGAATATATTACTTCCTGCAAGTGGAAAAGCAGTTTGTGTTCCTTCACAAGATATGGTTTTAGGACTTTATTATCTATCTTTGGAAAAAGAAAATGCAAAAGGAACAAATAAAATTTATTCAAGTGTTGATGAGGTTATGATAGCTGTTGATAGTGGATATTTAGATGTTCATGCAAAAATAAAAACTATGATTGAATCAAATACAGTATTTACAACAGCAGGAAGACTTATTCTAAAATCAATTATTCCTGATTTTATAGATGAAAAAATGTGGAATAAGATTTTAAAGAAAAAAGATATTGCAAATTTGATTGATCAAGTTTATGAAAAAGGTGGGCTTGAAGTAACAGCAAAATTCTTAGATGATTTAAAAGATTTAGGATTTGACTGGGCTACAAAGGCTGCAGTAAGTATCTCTATGGCTGATATAATAACTCCAAAGTCAAAAGTAAAATATGTAGAAGAGGCCAAAAAAGAGGTTAAAGAAATACAAAGTCAGTATGGCGTAGGTCTTTTAACAGATAGTGAAAGATATAACAAAATCATCGATATATGGACAAACACAAATACTAAAGTCGCAAGAGAGATGATGAATTTAATTGAGAATGATCAAAGTGGATTTAACTCTATTTATATGATGGCAGATAGTGGAGCTAGAGGTAGTGCTGCACAAATTCGTCAACTTGCTGGTATGAGAGGACTTATGGCAAAACCTGATGGAAGTATTATTGAAACTCCAATTACTTCAAATTTCCGTGAGGGATTGAATGTGCTTGAGTATTTTATCTCAACTCACGGTGCTAGAAAAGGTCTTGCAGATACTGCGTTAAAAACAGCAAATGCTGGATATTTAACAAGAAAACTAATCGATGTTGGGCAAAATGTTAAAATTACAATGCATGATTGTGGAACCCATGAAGGTATCGAAATAGCAGAAATAACTGCAAATGGTGCTTTGATAGAGAGCTTAGAAGATAGAATTGTTGGAAGAGTTTTAAGTGATGATGTAATTGATCCAATCACAAATGAAATACTTTTTTCTCAAGGTACTTTAATAGATGCACAAATTGCAAAAGAAATAACAGAAGCTGGAATTAAGGCAGTAAGTATTAGAACACCAATTACTTGTAAAGCTAAAAAAGGTGTTTGTGCAAAATGTTATGGAATAAATTTGGGTGAAGGTAAAATGGTAAAACCAGGAGAAGCAGTTGGAATTATTGCAGCTCAATCAATTGGTGAGCCAGGAACTCAGCTAACGCTTAGAACATTCCATGTTGGTGGAACAGCCTCA
PROTEIN sequence
Length: 652
DLYRRVINRNTRLKRLLELDAPEIIIRNEKRMLQEAVDALFDNGRRANAVKGANKRPLKSLSEIIKGKQGRFRQNLLGKRVDFSGRSVIVIGPNLKMDQCGLPKTMALELFKPHLIARLQEKGYAATVKQAKKMLDDKAVEVWECLEEVVKNYPIMLNRAPTLHKMSIQAFHPVLVDGKAIKLHPLVCAAFNADFDGDQMAVHVPLSQEAIAECKVLMLSSMNILLPASGKAVCVPSQDMVLGLYYLSLEKENAKGTNKIYSSVDEVMIAVDSGYLDVHAKIKTMIESNTVFTTAGRLILKSIIPDFIDEKMWNKILKKKDIANLIDQVYEKGGLEVTAKFLDDLKDLGFDWATKAAVSISMADIITPKSKVKYVEEAKKEVKEIQSQYGVGLLTDSERYNKIIDIWTNTNTKVAREMMNLIENDQSGFNSIYMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITSNFREGLNVLEYFISTHGARKGLADTALKTANAGYLTRKLIDVGQNVKITMHDCGTHEGIEIAEITANGALIESLEDRIVGRVLSDDVIDPITNEILFSQGTLIDAQIAKEITEAGIKAVSIRTPITCKAKKGVCAKCYGINLGEGKMVKPGEAVGIIAAQSIGEPGTQLTLRTFHVGGTAS