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NECEvent2014_5_2_scaffold_740_3

Organism: NECEvent2014_5_2_Propionibacterium_HGH0353-rel_63_29

near complete RP 51 / 55 MC: 6 BSCG 48 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: 813..2564

Top 3 Functional Annotations

Value Algorithm Source
Zn-dependent hydrolase, RNA-metabolizing, CPSF (EC:3.1.-.-) similarity KEGG
DB: KEGG
  • Identity: 75.5
  • Coverage: 563.0
  • Bit_score: 874
  • Evalue 2.10e-251
Ribonuclease J n=1 Tax=Propionibacterium sp. HGH0353 RepID=S3X8C3_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 583.0
  • Bit_score: 1150
  • Evalue 0.0
  • rbh
Ribonuclease J {ECO:0000313|EMBL:EPH06386.1}; TaxID=1203571 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium sp. HGH0353.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 583.0
  • Bit_score: 1150
  • Evalue 0.0

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Taxonomy

Propionibacterium sp. HGH0353 → Propionibacterium → Propionibacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1752
ATGAAGCGGTCAGGACACATCGGGGCGAAGCTGTCGGAGTTTCCCGATAGGCTTCACGCCGTGGCTAATACTGGATTGACGACACCCCCGGACCTGCAACCGGACGTTCTGCGCATCATTCCCCTCGGCGGCCTGGGAGATGTCGGACGCAACATGTCGTGCTACGAAATCAATGGGGAGATCCTTCTCATTGACTGTGGGGTGCTCTTCCCCGAGGACGACCATCCGGGAGTTGACCTGCTCCTGCCGCACCTGGACTACCTCGACGACGACAAACTGTCGCGGGTCACGGCCCTGTTGCTGACCCACGGCCACGAGGACCACATCGGTGCGGTGCCGTTCCTGCTCAAGCGTCGTCCGGACATCCCGGTCTACGGATCCAAGCTCACCCTTGCCCTGGTGGAGGCCAAGCTCAAGGAGCACCGCATCCGCAACTACGACCTGCGCGTGGTGCGTGAGGGCGACGCCGCCGAGATCGGCGAGGAGTTCGACGTCGAGTTCGTCGCCGTCAACCACTCCATCCCCGACGCGCTGGCCGTCTACGTCAAGACCGACGCCGGGTCGATCCTCAACACCGGCGACTTCAAGATGGACCAGCTGCCCATCGACGGGCGGATCACCGACCTGCGGGCCTTCGCCCGGCTCGGTGAGGAGGGTGTCGACGTCTTCATGGTCGACTCCACCAACGCCGAGGTGCCCGGGTTCGTGCGTTCCGAGCGTGACCTCGCCCCGGCCATCGAGCAGACCTTCGACCAGGCCACCCAGAAACTCATCGTTGCCACCTTCGCCTCACACGTCCACCGCGTCCAGCAGGCGGTCGACGCCGCCGTGCGGCACGGTCGCAAGATCTGCTACGTCGGGCGTTCCATGGTGCGCAACATGGCGATCGCCCGCGACCTGGGCTACCTCAAGGTGCCCGACGACTCACTCATCGAATTGCGTGATCTCGACAAGTACCCCGACGACAAGGTCGCCATCATCTGCACCGGTTCCCAGGGCGAGCCGCTGTCGGCCCTGGCCCGCATCGCCCACGGTGAGCACCGGGACATCTCGGTGGGGGAGGGTGACGTCGTGCTCATGGCGAGCTCGCTCATCCCCGGTAACGAGAACGCCGTCACCCGCGTCATCAATGGTCTCATGAGCTGCGGTGCCACGGTGGTGCACAAGGGCAATGCGCTGGTTCACGTCTCCGGGCACGCTGCCCAGGGCGAGCTGCTCTACGCCTACAATGTCGTGCGACCGCGCGCCGTCATGCCGATCCACGGCGAGTACCGGCATCTCACGGCGAATGCCCGTATCGCGGTGTCCACCGGTGTGCAGCCCGAGGACGCCATCGTCGTCACCGATGGCGGCGTCGTCGACCTGGACGATGGCCGGGCCAGCGTCGTCGGCAAGGTGGATGCCTCCTACATTCTCGTCGAGGGAACCGGGGTGAGCGAACTCACCCCCGATGCCCTGGCCGATCGCAAGATTCTCGGTGAGGAGGGGTTCATCTCGGTGTCGGCCGCCATCAACCCCAAGAGCGCGAGCATCGTGTCGGGGCCAGACATCAAGGCTAAGGGATTCGCCGAGGACGATCGTGGCTACGACGAGATCCGCGACCGACTCGTGAGCGAGTTGGAGTCGGCGATGCGCGGCGGCATGAGCGACCAGCACAAACTCCAGCAGGTTGCCCGACGCACCATCGGGCGCTGGGTGGCGCAGACCTACCGACGTCGTCCCATGATCGTGCCGACCATCATCGTCGTGTGA
PROTEIN sequence
Length: 584
MKRSGHIGAKLSEFPDRLHAVANTGLTTPPDLQPDVLRIIPLGGLGDVGRNMSCYEINGEILLIDCGVLFPEDDHPGVDLLLPHLDYLDDDKLSRVTALLLTHGHEDHIGAVPFLLKRRPDIPVYGSKLTLALVEAKLKEHRIRNYDLRVVREGDAAEIGEEFDVEFVAVNHSIPDALAVYVKTDAGSILNTGDFKMDQLPIDGRITDLRAFARLGEEGVDVFMVDSTNAEVPGFVRSERDLAPAIEQTFDQATQKLIVATFASHVHRVQQAVDAAVRHGRKICYVGRSMVRNMAIARDLGYLKVPDDSLIELRDLDKYPDDKVAIICTGSQGEPLSALARIAHGEHRDISVGEGDVVLMASSLIPGNENAVTRVINGLMSCGATVVHKGNALVHVSGHAAQGELLYAYNVVRPRAVMPIHGEYRHLTANARIAVSTGVQPEDAIVVTDGGVVDLDDGRASVVGKVDASYILVEGTGVSELTPDALADRKILGEEGFISVSAAINPKSASIVSGPDIKAKGFAEDDRGYDEIRDRLVSELESAMRGGMSDQHKLQQVARRTIGRWVAQTYRRRPMIVPTIIVV*