ggKbase home page

NECEvent2014_5_2_scaffold_868_5

Organism: NECEvent2014_5_2_Propionibacterium_HGH0353-rel_63_29

near complete RP 51 / 55 MC: 6 BSCG 48 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: comp(3356..5014)

Top 3 Functional Annotations

Value Algorithm Source
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=1203571 speci similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 552.0
  • Bit_score: 1091
  • Evalue 0.0
Transcription termination factor Rho n=1 Tax=Propionibacterium sp. HGH0353 RepID=S3X9M7_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 552.0
  • Bit_score: 1091
  • Evalue 0.0
  • rbh
transcription termination factor Rho similarity KEGG
DB: KEGG
  • Identity: 98.4
  • Coverage: 552.0
  • Bit_score: 1075
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Propionibacterium sp. HGH0353 → Propionibacterium → Propionibacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1659
CGTCGCCGCGACAAGGGCTCGGCTGATCCCGAGTCGCGCTCCTCTGAGGGCGAAAGGACTCCGTCGGTCGGTGACCTTCTCGATGCCGCAGAAGTGCAGAAGCGTGCCGACAAGGTGCCGGCGCAGGAAGACGGGGGTCAGCGCGGCGAGGACGGCACCAACGACCGTCCGCACCGTGACGATAGCGACCGTGGCGGTAGAGGAGACTCGCCGCGTCGTCGGGCTCGCAACACCTTCCGGGAGAATTCCAACGGCAATTCCGGCGACAATGTCAACGACGAGGTTGGTGCCCGGTTGGAGGCACTGTCCCGCGGGAAGAATGGCGAGCGTCCCCAACTGAATCGCAGCAGCCAGCGTGACCGCAACAACAATGACTCGACCCATGATTCTGACGACGATTACGGCCGCTCCTCGGAATATGGCAATGGTGGTCGCCGCTCACGCCGCCGCCGTCAGCGCGATCGACAGAATCGTCGCAAGCGTTCCAACGAGCGTTACTCCGATTCCGAGCCGAATCTCCGCGAGGATGACGTCCTCGTGCCTTGCTCCGGCATTCTCGACATTCGTGACCAGTACGCTTTCGTGCGCACCTCGGGATACCTGCCTGGCTCGAACGATGCCTATGTCTCGATGGCCATGGTCCGTCGCCATGGGCTGCGCAAGGGCGACGTCATTGTCGGTCAAATGCGTGCACACCGCGAGGGGGAGCGGCGTGAGAAGTTCGCACCCCTGGTCAAGATCGAGCAGGTCAACGGCGCGGATCCTGAGCAGATGAAACAGCGTCCCGAGTTCTCCAAGCTCACCCCGCTGTACCCGCAGGAACGTCTGCGCCTCGAGGATGATCCCAAGAACATGACGGGCCGCATCATCGACCTGGTCAGCCCGATCGGTAAGGGACAGCGCGGCCTCATCGTCTCGCCTCCGAAGGCTGGCAAGACGATGATCATGCAGTCGATCGCGAACTCGATCACCAAGAACAATCCTGAGGTTCACCTCATGGTGGTGCTGGTCGACGAGCGTCCCGAGGAGGTCACCGACTTCCAGCGCACCGTCAGTGGTGAGGTCATCGCGTCGACCTTTGACCGTCCTGCCGACGACCACACCCAGTTGTCCGAGTTGGCCATTGAGCGGGCCAAGCGTCTGGTGGAGCTCGGCCACGACGTCGTCATCCTGCTGGACGGAATCACCCGTCTGGGACGTGCCTACAACCTGGCTGCCCCTGCTTCGGGGCGAATCCTCTCCGGCGGTGTCGACTCCGCGGCTCTCTACCCGCCCAAGAAGTTCTTCGGTGCCGCCCGAAACATTGAGCACGGCGGCTCCCTGACGATTCTCGCCACCGCGCTCGTCGAGACCGGATCCAAGATGGATGAAGTCATCTTCGAGGAGTTCAAGGGCACCGGCAACATGGAGTTGCGTCTGCGCCGTGAGTTCGCCAACAAGAGGCTCTTCCCGGCCATCGACGTCGACGCATCGGGTACCCGTCGCGAGGAACTGCTGCTCTCGCGCGAGGAGACCGCGATCATGTGGAAGCTGCGACGCGTTCTCTCCGGCCTGGAAGATTCCCAGGCCCTCGAGATGATGCTCTCGAGGCTGCGCAAGACTCAGACCAACGTCGAGTTCCTCTACACGATCTCCAAGACGACTCCCAGCCAGGACTGA
PROTEIN sequence
Length: 553
RRRDKGSADPESRSSEGERTPSVGDLLDAAEVQKRADKVPAQEDGGQRGEDGTNDRPHRDDSDRGGRGDSPRRRARNTFRENSNGNSGDNVNDEVGARLEALSRGKNGERPQLNRSSQRDRNNNDSTHDSDDDYGRSSEYGNGGRRSRRRRQRDRQNRRKRSNERYSDSEPNLREDDVLVPCSGILDIRDQYAFVRTSGYLPGSNDAYVSMAMVRRHGLRKGDVIVGQMRAHREGERREKFAPLVKIEQVNGADPEQMKQRPEFSKLTPLYPQERLRLEDDPKNMTGRIIDLVSPIGKGQRGLIVSPPKAGKTMIMQSIANSITKNNPEVHLMVVLVDERPEEVTDFQRTVSGEVIASTFDRPADDHTQLSELAIERAKRLVELGHDVVILLDGITRLGRAYNLAAPASGRILSGGVDSAALYPPKKFFGAARNIEHGGSLTILATALVETGSKMDEVIFEEFKGTGNMELRLRREFANKRLFPAIDVDASGTRREELLLSREETAIMWKLRRVLSGLEDSQALEMMLSRLRKTQTNVEFLYTISKTTPSQD*