ggKbase home page

NECEvent2014_5_2_scaffold_1034_4

Organism: NECEvent2014_5_2_Propionibacterium_HGH0353-rel_63_29

near complete RP 51 / 55 MC: 6 BSCG 48 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: 2863..3606

Top 3 Functional Annotations

Value Algorithm Source
Polymerase n=1 Tax=Rice ragged stunt virus RepID=O89328_RRSV similarity UNIREF
DB: UNIREF100
  • Identity: 26.7
  • Coverage: 191.0
  • Bit_score: 84
  • Evalue 1.70e-13
Polymerase {ECO:0000313|EMBL:AAD09324.1}; TaxID=42475 species="Viruses; dsRNA viruses; Reoviridae; Spinareovirinae; Oryzavirus.;" source="Rice ragged stunt virus (RRSV).;" UNIPROT
DB: UniProtKB
  • Identity: 26.7
  • Coverage: 191.0
  • Bit_score: 84
  • Evalue 2.30e-13

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rice ragged stunt virus → Oryzavirus → Viruses

Sequences

DNA sequence
Length: 744
TTGCTCCGTACCGCGCCACCTCCTGCGAAGGTGGAAGGCGGCCATCTTGGGCTGGCGATCCCGGGTGAAGATGCCCTTCCGGTTGCCACCGACGCGCATGATGCCGCTGGTGGTCGCGAAGTCCGCGAAGTTCCAGATCTGTTCGCCGATAACGGCGTCGAAGGAGTCGAAGACCCGCTCGTTCATCTCAAGGACCTCGACCTGGTACTCCTCGCTCCACGGTTGAGCGGGGGTCTGGTGCAGGCCAGGCATGGTGTCGGCGCCGTACTCGGTGATGATGATCGGCTTGTTCTCGCTAGCCCAGCCCTCCATCTCCTCGTGCCAGTGACGCTCGGCGGCGGCGAGGTCACCGGTGTCGACGTACCAGCCGTAGTAACGGTTGAGGAGAAGGACGTCGGAGTACTGCGAAACCCGGCACGCCCCGTACGGGGCGAGCATGACGTTGACAAAGCTCACCGGGCGGGTGGGGTCAGCGTCACGGGCCACGTCGAAGAGGGGACGGAAGTAGTTTTCTGCCGCCTCGGTCTCGGACTCGGGCTCGTTGGCGATGGACCAGATGATGACGCTGGGGTGGTTCTTGTCACGGGCGATGAGGTCGCGGATGACCTGGGTGTGAACCTTCTGGGTCTCGCCGTTGATGGTCTCCTCGGAGAAGGTGGTGTAGCCCTGGGCGCCAAAATGCCGCCTCCCAAGCCCATGTTCATGCCCACTGCGGGAGTCTCGTCGATGACGAGCAATCCGTGA
PROTEIN sequence
Length: 248
LLRTAPPPAKVEGGHLGLAIPGEDALPVATDAHDAAGGREVREVPDLFADNGVEGVEDPLVHLKDLDLVLLAPRLSGGLVQARHGVGAVLGDDDRLVLASPALHLLVPVTLGGGEVTGVDVPAVVTVEEKDVGVLRNPARPVRGEHDVDKAHRAGGVSVTGHVEEGTEVVFCRLGLGLGLVGDGPDDDAGVVLVTGDEVADDLGVNLLGLAVDGLLGEGGVALGAKMPPPKPMFMPTAGVSSMTSNP*