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NECEvent2014_5_2_Propionibacterium_HGH0353-rel_63_29

NECEvent2014_5_2_Propionibacterium_sp__HGH0353_63_29
In projects: NECEvent2014_5_2

Consensus taxonomy: Propionibacterium sp. HGH0353  →  Propionibacterium  →  Propionibacteriales  →  Actinobacteria  →  Actinobacteria  →  Bacteria

Displaying items 601-650 of 695 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_5_2_scaffold_5088 175_001_scaffold_5088
Species: Propionibacterium sp. KPL1838 (50%)
2 1317 bp 59.98 37.47 79.95
NECEvent2014_5_2_scaffold_2623 175_001_scaffold_2623
Species: Propionibacterium avidum (50%)
2 2140 bp 61.40 31.19 79.91
NECEvent2014_5_2_scaffold_4239 175_001_scaffold_4239
Species: Propionibacterium sp. HGH0353 (100%)
2 1508 bp 60.01 37.20 79.77
NECEvent2014_5_2_scaffold_6252 175_001_scaffold_6252
Species: Propionibacterium sp. HGH0353 (66.67%)
3 1118 bp 63.95 30.46 79.70
NECEvent2014_5_2_scaffold_1709 175_001_scaffold_1709
Species: Propionibacterium avidum (50%)
4 2980 bp 61.34 18.52 79.63
NECEvent2014_5_2_scaffold_2432 175_001_scaffold_2432
Species: Propionibacterium avidum (50%)
2 2252 bp 61.55 13.99 79.53
NECEvent2014_5_2_scaffold_5236 175_001_scaffold_5236
Phylum: Actinobacteria (50%)
4 1289 bp 61.44 24.79 79.36
NECEvent2014_5_2_scaffold_387 175_001_scaffold_387
Species: Propionibacterium sp. HGH0353 (94.12%)
17 11565 bp 64.51 18.92 79.17
NECEvent2014_5_2_scaffold_5424 175_001_scaffold_5424
Species: Propionibacterium sp. KPL1852 (50%)
2 1254 bp 63.80 18.30 78.95
NECEvent2014_5_2_scaffold_5117 175_001_scaffold_5117
Species: Propionibacterium freudenreichii (100%)
1 1311 bp 65.29 10.07 78.95
NECEvent2014_5_2_scaffold_3021 175_001_scaffold_3021
Species: Propionibacterium sp. HGH0353 (66.67%)
3 1927 bp 62.58 34.95 78.93
NECEvent2014_5_2_scaffold_5923 175_001_scaffold_5923
Genus: Propionibacterium (60%)
5 1169 bp 60.74 37.08 78.87
NECEvent2014_5_2_scaffold_4979 175_001_scaffold_4979
Species: Propionibacterium sp. KPL2005 (50%)
2 1341 bp 64.06 18.68 78.75
NECEvent2014_5_2_scaffold_1694 175_001_scaffold_1694
Species: Propionibacterium sp. HGH0353 (100%)
3 2993 bp 62.48 33.68 78.28
NECEvent2014_5_2_scaffold_1745 175_001_scaffold_1745
Genus: Propionibacterium (66.67%)
6 2917 bp 60.27 19.59 78.27
NECEvent2014_5_2_scaffold_1054 175_001_scaffold_1054
Species: Propionibacterium sp. KPL1852 (50%)
6 4255 bp 62.02 39.34 78.19
NECEvent2014_5_2_scaffold_5305 175_001_scaffold_5305
Species: Propionibacterium sp. HGH0353 (100%)
1 1277 bp 62.88 37.59 78.00
NECEvent2014_5_2_scaffold_6122 175_001_scaffold_6122
Species: Propionibacterium sp. KPL1838 (50%)
2 1136 bp 62.68 22.45 77.90
NECEvent2014_5_2_scaffold_1058 175_001_scaffold_1058
Species: Propionibacterium sp. DORA_15 (100%)
3 4241 bp 50.86 46.83 77.88
NECEvent2014_5_2_scaffold_6858 175_001_scaffold_6858
Genus: Propionibacterium (66.67%)
3 1035 bp 60.29 27.25 77.68
NECEvent2014_5_2_scaffold_2795 175_001_scaffold_2795
Species: Propionibacterium sp. HGH0353 (66.67%)
3 2040 bp 66.47 34.71 77.65
NECEvent2014_5_2_scaffold_5251 175_001_scaffold_5251
Genus: Propionibacterium (66.67%)
3 1287 bp 60.30 34.38 77.62
NECEvent2014_5_2_scaffold_5681 175_001_scaffold_5681 5 1210 bp 59.59 37.81 77.52
NECEvent2014_5_2_scaffold_6034 175_001_scaffold_6034
Species: Propionibacterium sp. KPL1852 (50%)
2 1151 bp 63.42 23.07 77.41
NECEvent2014_5_2_scaffold_5093 175_001_scaffold_5093
Species: Propionibacterium sp. KPL1838 (50%)
2 1316 bp 63.53 12.31 77.28
NECEvent2014_5_2_scaffold_2497 175_001_scaffold_2497
Species: Propionibacterium sp. HGH0353 (100%)
2 2216 bp 60.20 31.00 77.03
NECEvent2014_5_2_scaffold_1033 175_001_scaffold_1033
Species: Propionibacterium sp. KPL1852 (50%)
4 4336 bp 61.39 20.34 77.01
NECEvent2014_5_2_scaffold_1061 175_001_scaffold_1061
Species: Propionibacterium sp. HGH0353 (50%)
4 4228 bp 62.96 33.60 76.99
NECEvent2014_5_2_scaffold_5643 175_001_scaffold_5643
Species: Propionibacterium sp. KPL1852 (100%)
3 1217 bp 61.71 37.59 76.66
NECEvent2014_5_2_scaffold_600 175_001_scaffold_600
Genus: Propionibacterium (100%)
9 7441 bp 63.37 36.18 76.52
NECEvent2014_5_2_scaffold_1495 175_001_scaffold_1495
Genus: Propionibacterium (66.67%)
3 3267 bp 62.41 30.26 76.03
NECEvent2014_5_2_scaffold_5329 175_001_scaffold_5329
Species: Propionibacterium sp. KPL1852 (50%)
2 1272 bp 65.25 36.32 75.94
NECEvent2014_5_2_scaffold_4144 175_001_scaffold_4144
Species: Propionibacterium sp. KPL1838 (50%)
2 1534 bp 63.62 13.10 75.88
NECEvent2014_5_2_scaffold_264 175_001_scaffold_264
Genus: Propionibacterium (72.22%)
18 16860 bp 63.01 19.48 75.87
NECEvent2014_5_2_scaffold_3776 175_001_scaffold_3776
Species: Propionibacterium sp. HGH0353 (100%)
2 1645 bp 64.26 35.65 75.68
NECEvent2014_5_2_scaffold_2072 175_001_scaffold_2072
Genus: Propionibacterium (100%)
3 2548 bp 61.54 35.91 75.59
NECEvent2014_5_2_scaffold_2486 175_001_scaffold_2486
Species: Propionibacterium sp. HGH0353 (60%)
5 2223 bp 57.67 15.45 75.57
NECEvent2014_5_2_scaffold_1589 175_001_scaffold_1589
Genus: Propionibacterium (100%)
3 3125 bp 62.46 26.06 75.46
NECEvent2014_5_2_scaffold_3027 175_001_scaffold_3027
Species: Propionibacterium sp. HGH0353 (80%)
5 1925 bp 61.97 16.52 75.43
NECEvent2014_5_2_scaffold_2255 175_001_scaffold_2255
Species: Propionibacterium sp. HGH0353 (66.67%)
3 2382 bp 58.98 30.79 75.31
NECEvent2014_5_2_scaffold_3778 175_001_scaffold_3778
Species: Propionibacterium sp. HGH0353 (66.67%)
3 1645 bp 63.04 27.99 75.26
NECEvent2014_5_2_scaffold_2601 175_001_scaffold_2601
Genus: Propionibacterium (66.67%)
3 2151 bp 59.14 18.55 75.17
NECEvent2014_5_2_scaffold_745 175_001_scaffold_745
Genus: Propionibacterium (57.14%)
7 5978 bp 64.99 13.40 75.03
NECEvent2014_5_2_scaffold_6005 175_001_scaffold_6005
Species: Propionibacterium sp. KPL1838 (100%)
1 1154 bp 66.12 9.75 74.87
NECEvent2014_5_2_scaffold_581 175_001_scaffold_581
Genus: Propionibacterium (85.71%)
7 7714 bp 61.47 13.53 74.75
NECEvent2014_5_2_scaffold_705 175_001_scaffold_705
Genus: Propionibacterium (100%)
8 6276 bp 60.91 16.83 74.57
NECEvent2014_5_2_scaffold_3013 175_001_scaffold_3013
Species: Propionibacterium sp. HGH0353 (100%)
2 1929 bp 60.24 29.86 74.49
NECEvent2014_5_2_scaffold_2361 175_001_scaffold_2361
Genus: Propionibacterium (66.67%)
3 2308 bp 60.79 32.82 74.48
NECEvent2014_5_2_scaffold_3493 175_001_scaffold_3493
Species: Propionibacterium sp. KPL2000 (50%)
2 1741 bp 62.61 10.51 74.27
NECEvent2014_5_2_scaffold_3438 175_001_scaffold_3438
Species: Propionibacterium sp. HGH0353 (100%)
2 1759 bp 59.92 15.18 73.51
Displaying items 601-650 of 695 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.