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NECEvent2014_5_2_Propionibacterium_HGH0353-rel_63_29

NECEvent2014_5_2_Propionibacterium_sp__HGH0353_63_29
In projects: NECEvent2014_5_2

Consensus taxonomy: Propionibacterium sp. HGH0353  →  Propionibacterium  →  Propionibacteriales  →  Actinobacteria  →  Actinobacteria  →  Bacteria

Displaying items 301-350 of 695 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_5_2_scaffold_1644 175_001_scaffold_1644
Species: Propionibacterium avidum (50%)
2 3061 bp 64.10 15.44 93.89
NECEvent2014_5_2_scaffold_2791 175_001_scaffold_2791
Species: Propionibacterium sp. HGH0353 (100%)
2 2043 bp 64.46 36.56 93.83
NECEvent2014_5_2_scaffold_462 175_001_scaffold_462
Genus: Propionibacterium (100%)
11 9678 bp 62.54 32.92 93.83
NECEvent2014_5_2_scaffold_591 175_001_scaffold_591
Species: Propionibacterium sp. HGH0353 (75%)
8 7588 bp 62.59 25.82 93.82
NECEvent2014_5_2_scaffold_2008 175_001_scaffold_2008
Species: Propionibacterium avidum (50%)
4 2607 bp 63.25 23.07 93.79
NECEvent2014_5_2_scaffold_5621 175_001_scaffold_5621
Species: Propionibacterium sp. HGH0353 (50%)
2 1222 bp 64.73 26.88 93.78
NECEvent2014_5_2_scaffold_690 175_001_scaffold_690
Species: Propionibacterium sp. HGH0353 (62.5%)
8 6469 bp 63.09 28.01 93.68
NECEvent2014_5_2_scaffold_3549 175_001_scaffold_3549
Species: Propionibacterium avidum (66.67%)
3 1720 bp 64.83 31.05 93.66
NECEvent2014_5_2_scaffold_1099 175_001_scaffold_1099
Species: Propionibacterium sp. KPL1852 (50%)
4 4127 bp 64.87 32.57 93.63
NECEvent2014_5_2_scaffold_383 175_001_scaffold_383
Species: Propionibacterium sp. HGH0353 (83.33%)
12 11698 bp 63.80 32.60 93.61
NECEvent2014_5_2_scaffold_862 175_001_scaffold_862
Species: Propionibacterium sp. HGH0353 (100%)
3 5067 bp 63.94 29.28 93.61
NECEvent2014_5_2_scaffold_6088 175_001_scaffold_6088
Species: Propionibacterium sp. HGH0353 (50%)
2 1141 bp 62.23 32.73 93.60
NECEvent2014_5_2_scaffold_394 175_001_scaffold_394
Species: Propionibacterium sp. HGH0353 (81.82%)
11 11358 bp 64.45 35.90 93.58
NECEvent2014_5_2_scaffold_749 175_001_scaffold_749
Species: Propionibacterium sp. HGH0353 (66.67%)
6 5949 bp 63.67 28.09 93.56
NECEvent2014_5_2_scaffold_1245 175_001_scaffold_1245
Species: Propionibacterium sp. HGH0353 (66.67%)
3 3740 bp 61.87 33.65 93.53
NECEvent2014_5_2_scaffold_622 175_001_scaffold_622
Species: Propionibacterium sp. HGH0353 (100%)
4 7135 bp 64.09 36.24 93.47
NECEvent2014_5_2_scaffold_1204 175_001_scaffold_1204
Species: Propionibacterium avidum (75%)
4 3839 bp 63.01 32.70 93.46
NECEvent2014_5_2_scaffold_5894 175_001_scaffold_5894
Species: Propionibacterium humerusii (50%)
2 1175 bp 62.64 14.81 93.45
NECEvent2014_5_2_scaffold_2641 175_001_scaffold_2641
Species: Propionibacterium sp. HGH0353 (100%)
3 2130 bp 63.43 28.31 93.38
NECEvent2014_5_2_scaffold_2410 175_001_scaffold_2410
Genus: Propionibacterium (75%)
4 2269 bp 62.71 27.77 93.35
NECEvent2014_5_2_scaffold_596 175_001_scaffold_596
Species: Propionibacterium sp. HGH0353 (80%)
10 7502 bp 64.65 33.09 93.34
NECEvent2014_5_2_scaffold_6977 175_001_scaffold_6977
Species: Propionibacterium sp. HGH0353 (100%)
2 1019 bp 64.47 40.63 93.33
NECEvent2014_5_2_scaffold_906 175_001_scaffold_906
Species: Propionibacterium avidum (60%)
5 4870 bp 64.97 32.65 93.33
NECEvent2014_5_2_scaffold_6333 175_001_scaffold_6333
Species: Propionibacterium sp. HGH0353 (100%)
1 1106 bp 62.75 31.74 93.31
NECEvent2014_5_2_scaffold_509 175_001_scaffold_509
Species: Propionibacterium sp. HGH0353 (100%)
6 8734 bp 64.17 32.01 93.29
NECEvent2014_5_2_scaffold_618 175_001_scaffold_618
Species: Propionibacterium sp. HGH0353 (85.71%)
7 7168 bp 64.10 33.42 93.29
NECEvent2014_5_2_scaffold_320 175_001_scaffold_320
Species: Propionibacterium sp. HGH0353 (92.86%)
14 13824 bp 63.72 35.20 93.23
NECEvent2014_5_2_scaffold_1646 175_001_scaffold_1646
Species: Propionibacterium sp. KPL1838 (75%)
4 3057 bp 66.70 33.66 93.23
NECEvent2014_5_2_scaffold_4976 175_001_scaffold_4976
Species: Propionibacterium avidum (50%)
2 1342 bp 65.80 134.35 93.22
NECEvent2014_5_2_scaffold_3540 175_001_scaffold_3540
Species: Propionibacterium sp. HGH0353 (80%)
5 1723 bp 68.66 24.55 93.21
NECEvent2014_5_2_scaffold_1053 175_001_scaffold_1053
Species: Propionibacterium sp. HGH0353 (100%)
6 4256 bp 61.72 33.27 93.19
NECEvent2014_5_2_scaffold_6914 175_001_scaffold_6914
Species: Propionibacterium sp. HGH0353 (66.67%)
3 1027 bp 64.65 10.37 93.18
NECEvent2014_5_2_scaffold_467 175_001_scaffold_467
Species: Propionibacterium sp. HGH0353 (76.92%)
13 9620 bp 63.85 33.23 93.15
NECEvent2014_5_2_scaffold_1916 175_001_scaffold_1916
Species: Propionibacterium avidum (100%)
3 2714 bp 62.68 26.58 93.07
NECEvent2014_5_2_scaffold_2575 175_001_scaffold_2575
Species: Propionibacterium sp. HGH0353 (66.67%)
3 2164 bp 66.54 33.41 93.07
NECEvent2014_5_2_scaffold_1132 175_001_scaffold_1132
Species: Propionibacterium sp. HGH0353 (83.33%)
6 4033 bp 66.90 37.08 93.06
NECEvent2014_5_2_scaffold_920 175_001_scaffold_920
Genus: Propionibacterium (100%)
7 4822 bp 60.56 22.99 93.01
NECEvent2014_5_2_scaffold_1213 175_001_scaffold_1213
Species: Propionibacterium sp. HGH0353 (75%)
4 3826 bp 64.56 33.01 93.00
NECEvent2014_5_2_scaffold_1886 175_001_scaffold_1886
Species: Propionibacterium sp. HGH0353 (80%)
5 4811 bp 64.33 28.87 92.97
NECEvent2014_5_2_scaffold_554 175_001_scaffold_554
Genus: Propionibacterium (58.33%)
12 8083 bp 62.91 31.53 92.97
NECEvent2014_5_2_scaffold_1163 175_001_scaffold_1163
Species: Propionibacterium sp. HGH0353 (66.67%)
3 3950 bp 64.73 31.78 92.96
NECEvent2014_5_2_scaffold_774 175_001_scaffold_774
Species: Propionibacterium acnes (66.67%)
6 5699 bp 65.03 31.06 92.91
NECEvent2014_5_2_scaffold_405 175_001_scaffold_405
Species: Propionibacterium sp. HGH0353 (54.55%)
11 10998 bp 64.01 39.58 92.91
NECEvent2014_5_2_scaffold_199 175_001_scaffold_199
Order: Micrococcales (66.67%)
18 20760 bp 64.97 17.39 92.88
NECEvent2014_5_2_scaffold_3641 175_001_scaffold_3641
Species: Propionibacterium sp. HGH0353 (100%)
3 1690 bp 65.38 36.21 92.84
NECEvent2014_5_2_scaffold_1608 175_001_scaffold_1608
Species: Propionibacterium sp. HGH0353 (75%)
4 3098 bp 64.07 38.88 92.77
NECEvent2014_5_2_scaffold_7091 175_001_scaffold_7091
Species: Propionibacterium sp. KPL1838 (100%)
1 1006 bp 63.92 25.80 92.74
NECEvent2014_5_2_scaffold_6604 175_001_scaffold_6604
Genus: Propionibacterium (75%)
4 1067 bp 57.92 17.15 92.69
NECEvent2014_5_2_scaffold_1128 175_001_scaffold_1128
Species: Propionibacterium sp. HGH0353 (100%)
4 4039 bp 62.69 36.58 92.62
NECEvent2014_5_2_scaffold_1785 175_001_scaffold_1785
Species: Propionibacterium sp. HGH0353 (100%)
4 2866 bp 63.61 29.20 92.53
Displaying items 301-350 of 695 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.