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NECEvent2014_5_2_Propionibacterium_HGH0353-rel_63_29

NECEvent2014_5_2_Propionibacterium_sp__HGH0353_63_29
In projects: NECEvent2014_5_2

Consensus taxonomy: Propionibacterium sp. HGH0353  →  Propionibacterium  →  Propionibacteriales  →  Actinobacteria  →  Actinobacteria  →  Bacteria

Displaying items 401-450 of 695 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_5_2_scaffold_250 175_001_scaffold_250
Species: Propionibacterium sp. HGH0353 (66.67%)
15 17550 bp 65.10 33.94 90.67
NECEvent2014_5_2_scaffold_700 175_001_scaffold_700
Species: Propionibacterium sp. HGH0353 (100%)
6 6381 bp 63.69 34.58 90.64
NECEvent2014_5_2_scaffold_3055 175_001_scaffold_3055
Species: Propionibacterium sp. HGH0353 (100%)
1 1913 bp 60.74 28.46 90.64
NECEvent2014_5_2_scaffold_634 175_001_scaffold_634
Species: Propionibacterium sp. HGH0353 (90%)
10 7051 bp 61.93 34.74 90.63
NECEvent2014_5_2_scaffold_870 175_001_scaffold_870
Species: Propionibacterium sp. HGH0353 (100%)
4 5009 bp 61.69 38.51 90.62
NECEvent2014_5_2_scaffold_5382 175_001_scaffold_5382
Species: Propionibacterium sp. HGH0353 (50%)
2 1259 bp 63.78 31.10 90.55
NECEvent2014_5_2_scaffold_1198 175_001_scaffold_1198
Species: Propionibacterium sp. HGH0353 (66.67%)
3 3861 bp 64.98 18.45 90.52
NECEvent2014_5_2_scaffold_2385 175_001_scaffold_2385
Species: Propionibacterium sp. HGH0353 (66.67%)
3 2287 bp 64.28 36.47 90.51
NECEvent2014_5_2_scaffold_999 175_001_scaffold_999
Species: Propionibacterium sp. HGH0353 (60%)
5 4465 bp 62.31 31.31 90.50
NECEvent2014_5_2_scaffold_279 175_001_scaffold_279
Species: Propionibacterium sp. HGH0353 (78.57%)
14 16193 bp 62.95 36.62 90.50
NECEvent2014_5_2_scaffold_232 175_001_scaffold_232
Species: Propionibacterium sp. KPL1838 (52.94%)
17 18742 bp 62.75 33.67 90.49
NECEvent2014_5_2_scaffold_226 175_001_scaffold_226
Genus: Propionibacterium (94.74%)
19 18946 bp 63.52 32.30 90.46
NECEvent2014_5_2_scaffold_1321 175_001_scaffold_1321
Species: Propionibacterium sp. HGH0353 (100%)
4 3579 bp 62.25 32.40 90.44
NECEvent2014_5_2_scaffold_1520 175_001_scaffold_1520
Genus: Propionibacterium (60%)
5 3228 bp 60.97 11.06 90.43
NECEvent2014_5_2_scaffold_3271 175_001_scaffold_3271
Species: Propionibacterium sp. HGH0353 (100%)
2 1819 bp 62.56 15.75 90.38
NECEvent2014_5_2_scaffold_4825 175_001_scaffold_4825
Species: Propionibacterium sp. HGH0353 (50%)
2 1368 bp 60.09 32.68 90.35
NECEvent2014_5_2_scaffold_490 175_001_scaffold_490
Genus: Propionibacterium (100%)
14 9045 bp 64.36 33.32 90.32
NECEvent2014_5_2_scaffold_1335 175_001_scaffold_1335
Genus: Propionibacterium (100%)
4 3555 bp 62.64 37.13 90.30
NECEvent2014_5_2_scaffold_1659 175_001_scaffold_1659
Genus: Propionibacterium (100%)
3 3037 bp 61.64 30.92 90.29
NECEvent2014_5_2_scaffold_2719 175_001_scaffold_2719
Species: Propionibacterium sp. HGH0353 (50%)
2 2087 bp 63.92 39.96 90.27
NECEvent2014_5_2_scaffold_524 175_001_scaffold_524
Genus: Propionibacterium (88.89%)
9 8512 bp 64.70 34.77 90.24
NECEvent2014_5_2_scaffold_452 175_001_scaffold_452
Species: Propionibacterium sp. HGH0353 (53.85%)
13 10792 bp 63.99 33.80 90.21
NECEvent2014_5_2_scaffold_823 175_001_scaffold_823
Species: Propionibacterium sp. HGH0353 (71.43%)
7 5355 bp 60.49 33.75 90.20
NECEvent2014_5_2_scaffold_998 175_001_scaffold_998
Species: Propionibacterium sp. HGH0353 (62.5%)
8 4467 bp 64.18 34.28 90.13
NECEvent2014_5_2_scaffold_667 175_001_scaffold_667
Species: Propionibacterium sp. KPL1852 (50%)
6 6684 bp 65.90 36.36 90.13
NECEvent2014_5_2_scaffold_2080 175_001_scaffold_2080
Genus: Propionibacterium (100%)
3 2537 bp 64.49 15.08 90.11
NECEvent2014_5_2_scaffold_1371 175_001_scaffold_1371
Species: Propionibacterium sp. KPL1838 (75%)
4 3486 bp 64.23 33.43 90.10
NECEvent2014_5_2_scaffold_6974 175_001_scaffold_6974
Species: Propionibacterium sp. KPL1844 (100%)
1 1019 bp 59.57 11.78 90.09
NECEvent2014_5_2_scaffold_6980 175_001_scaffold_6980
Species: Propionibacterium sp. HGH0353 (100%)
1 1019 bp 60.26 26.50 90.09
NECEvent2014_5_2_scaffold_2240 175_001_scaffold_2240
Species: Propionibacterium sp. HGH0353 (75%)
4 2398 bp 62.39 30.03 90.08
NECEvent2014_5_2_scaffold_2672 175_001_scaffold_2672
Species: Propionibacterium sp. KPL1852 (100%)
1 2113 bp 63.70 35.00 90.01
NECEvent2014_5_2_scaffold_4319 175_001_scaffold_4319
Species: Propionibacterium sp. KPL1852 (50%)
2 1490 bp 61.14 33.62 90.00
NECEvent2014_5_2_scaffold_3306 175_001_scaffold_3306
Species: Propionibacterium sp. HGH0353 (100%)
2 1807 bp 63.92 32.29 89.98
NECEvent2014_5_2_scaffold_6555 175_001_scaffold_6555
Species: Propionibacterium avidum (50%)
2 1074 bp 63.04 26.40 89.94
NECEvent2014_5_2_scaffold_1183 175_001_scaffold_1183
Species: Propionibacterium sp. KPL2005 (50%)
6 3900 bp 64.41 36.96 89.92
NECEvent2014_5_2_scaffold_398 175_001_scaffold_398
Species: Propionibacterium sp. HGH0353 (75%)
8 11219 bp 59.09 17.85 89.90
NECEvent2014_5_2_scaffold_5873 175_001_scaffold_5873
Species: Propionibacterium sp. KPL2005 (100%)
1 1178 bp 60.87 15.53 89.90
NECEvent2014_5_2_scaffold_569 175_001_scaffold_569
Species: Propionibacterium sp. HGH0353 (80%)
10 7867 bp 63.02 36.65 89.88
NECEvent2014_5_2_scaffold_1265 175_001_scaffold_1265
Species: Propionibacterium avidum (80%)
5 3683 bp 62.07 33.27 89.85
NECEvent2014_5_2_scaffold_3579 175_001_scaffold_3579
Species: Propionibacterium sp. KPL1852 (50%)
2 1710 bp 62.92 27.81 89.82
NECEvent2014_5_2_scaffold_285 175_001_scaffold_285
Species: Propionibacterium sp. HGH0353 (93.33%)
15 15838 bp 64.43 33.64 89.82
NECEvent2014_5_2_scaffold_3221 175_001_scaffold_3221
Genus: Propionibacterium (100%)
3 1844 bp 60.03 12.85 89.80
NECEvent2014_5_2_scaffold_1569 175_001_scaffold_1569
Species: Propionibacterium sp. KPL1852 (50%)
2 3158 bp 64.88 36.95 89.77
NECEvent2014_5_2_scaffold_2114 175_001_scaffold_2114
Species: Propionibacterium sp. KPL2005 (66.67%)
3 2511 bp 60.10 12.60 89.73
NECEvent2014_5_2_scaffold_484 175_001_scaffold_484
Species: Propionibacterium sp. HGH0353 (66.67%)
9 9201 bp 62.97 33.09 89.70
NECEvent2014_5_2_scaffold_576 175_001_scaffold_576
Species: Propionibacterium sp. HGH0353 (71.43%)
7 7757 bp 60.23 23.57 89.69
NECEvent2014_5_2_scaffold_4095 175_001_scaffold_4095
Genus: Propionibacterium (100%)
3 1549 bp 64.04 13.94 89.67
NECEvent2014_5_2_scaffold_4427 175_001_scaffold_4427
Species: Propionibacterium avidum (100%)
1 1459 bp 67.65 58.40 89.65
NECEvent2014_5_2_scaffold_1013 175_001_scaffold_1013
Species: Propionibacterium sp. HGH0353 (50%)
4 4418 bp 61.93 37.45 89.63
NECEvent2014_5_2_scaffold_2761 175_001_scaffold_2761
Species: Propionibacterium sp. HGH0353 (50%)
2 2062 bp 64.55 36.23 89.62
Displaying items 401-450 of 695 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.