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NECEvent2014_5_3_scaffold_3895_1

Organism: NECEvent2014_5_3_UNK

partial RP 0 / 55 BSCG 0 / 51 ASCG 1 / 38
Location: 3..326

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=1403945 species="Bacteria; F similarity UNIPROT
DB: UniProtKB
  • Identity: 98.1
  • Coverage: 107.0
  • Bit_score: 210
  • Evalue 1.60e-51
UPI0003D5BEB1 related cluster n=1 Tax=unknown RepID=UPI0003D5BEB1 similarity UNIREF
DB: UNIREF100
  • Identity: 97.2
  • Coverage: 107.0
  • Bit_score: 208
  • Evalue 2.50e-51
transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 39.7
  • Coverage: 68.0
  • Bit_score: 60
  • Evalue 3.10e-07

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Taxonomy

Negativicoccus succinicivorans → Negativicoccus → Selenomonadales → Negativicutes → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 324
GTGGACCGGTTCGGTACGCCGCCCGCGCCTGTGGAACAATTACTGCGCGTGGCGCAGTTGCGCGTGCTTGCGGCGAAAGCCGGCATCGGCAGTATTCGAGAGTTGCAAAACACGGTGGAGATCACGTGGAACCGACCGGAAGCGATGGCGACTTGGGACGTTGCCAAAGTGCCCGCGAAAGTGATGAAAAGTTTACGCTTTTTGCCAGGCGAGGTGCCGCGTGCTACAATAAATAAGTTACAGTGGAGTCATTCCGCGGTGGATTTTCTGCCGGAAATATTAGCGGCTTTTTTACAGGAAGATATTGCGCAAAGCAAGGAGTAA
PROTEIN sequence
Length: 108
VDRFGTPPAPVEQLLRVAQLRVLAAKAGIGSIRELQNTVEITWNRPEAMATWDVAKVPAKVMKSLRFLPGEVPRATINKLQWSHSAVDFLPEILAAFLQEDIAQSKE*