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NECEvent2014_5_3_scaffold_1131_3

Organism: NECEvent2014_5_3_Clostridium_paraputrificum_30_27

near complete RP 50 / 55 MC: 2 BSCG 51 / 51 ASCG 15 / 38 MC: 2
Location: 3184..4086

Top 3 Functional Annotations

Value Algorithm Source
UPI0002E08C8D related cluster n=1 Tax=unknown RepID=UPI0002E08C8D similarity UNIREF
DB: UNIREF100
  • Identity: 32.7
  • Coverage: 278.0
  • Bit_score: 170
  • Evalue 3.60e-39
LicD family protein {ECO:0000313|EMBL:CDE39337.1}; TaxID=1263018 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:321.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 35.9
  • Coverage: 276.0
  • Bit_score: 169
  • Evalue 6.70e-39
LPS biosynthesis protein similarity KEGG
DB: KEGG
  • Identity: 36.6
  • Coverage: 262.0
  • Bit_score: 163
  • Evalue 1.30e-37

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Taxonomy

Firmicutes bacterium CAG:321 → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 903
GTGAAAGATATTTATACAGACATTGAAACCAAAAAGTCAATAAAGTATAATTGTTTACAAATGATATTGTTAAATTTGGGAGGAAATATGGTTAGTTATGATATTAGAAAACTTCAGCTAGTACAATTAGAAATATTAAAGGATATTGATAAGATTTGTAAGGAGAATAATATACAATATTATATTTTTTATGGTACATTACTAGGTGCAATAAGACATGAGGGATTTATTCCTTGGGATGATGATATCGATATAGGAATGTTACATAATGATTTTGTGAAATTTAATAAATTATGTGAAGAGAAATTACCTGAAAAGTATTTTTTACAAAATGAAAAAACAGATAAAAATTTTCCTAGAATGTGGTCAAAAATTAGAATAAACAATACTTGTAATATGGAAAGAGAATATAGAAGATTAAAAGTTCATTATGGCATAGATATGGATGTATTCGATATAATATATCTTTCAGATAATTTAGTATTTAGAAAAATTCAAAAAGCTTGTGCATATATTTATAGATTACTTATGTTCGAAAAGGCACATAATGCTATTGATGATGAATTTAAAAGAAGTAGAGACACTAAAATATATAAAATATTACCAGGCTTCTTGAAAAGTTGGTTGTTGAAGTTATCCAAAAAAATAACTTATTGTACTGCAAGTAAGAAAAGCAATTATGTAATGGATGTTAGTGAAATATTAATTATGGACAGTGATATATTTGAAAAAACTAAGATGTTAAAGTTTGAGGGTGAGGAATTTTTTGCTCCATATAAATCAGAAAAATTTTTAGAAGAATATTATGGGGATTATATGACGTTGCCACCTGAAAATGAAAGAAATGGACATGGGGATAGGATTGTAGATTTTGAAAATTCTTATGAAAAATATACACTATAG
PROTEIN sequence
Length: 301
VKDIYTDIETKKSIKYNCLQMILLNLGGNMVSYDIRKLQLVQLEILKDIDKICKENNIQYYIFYGTLLGAIRHEGFIPWDDDIDIGMLHNDFVKFNKLCEEKLPEKYFLQNEKTDKNFPRMWSKIRINNTCNMEREYRRLKVHYGIDMDVFDIIYLSDNLVFRKIQKACAYIYRLLMFEKAHNAIDDEFKRSRDTKIYKILPGFLKSWLLKLSKKITYCTASKKSNYVMDVSEILIMDSDIFEKTKMLKFEGEEFFAPYKSEKFLEEYYGDYMTLPPENERNGHGDRIVDFENSYEKYTL*