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NECEvent2014_5_3_scaffold_3506_2

Organism: NECEvent2014_5_3_Campylobacter_ureolyticus_rel_29_5_partial

partial RP 37 / 55 MC: 1 BSCG 30 / 51 ASCG 6 / 38 MC: 1
Location: 182..1720

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase su similarity UNIPROT
DB: UniProtKB
  • Identity: 98.1
  • Coverage: 513.0
  • Bit_score: 1003
  • Evalue 1.30e-289
rpoB; DNA-directed RNA polymerase, beta subunit (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 76.3
  • Coverage: 514.0
  • Bit_score: 806
  • Evalue 4.80e-231
DNA-directed RNA polymerase subunit beta n=1 Tax=Campylobacter ureolyticus RepID=UPI000360AD63 similarity UNIREF
DB: UNIREF100
  • Identity: 99.6
  • Coverage: 513.0
  • Bit_score: 1010
  • Evalue 7.80e-292
  • rbh

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Taxonomy

Campylobacter ureolyticus → Campylobacter → Campylobacterales → Epsilonproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1539
ATGCTAAATAGCCTATATTCTGGAAATCGTCTTAGGGTTGATTTTTCAAAAGCCAAAAAAGAGATTGATATTCCAAATTTATTACAATTACAAAAAAAGAGTTTTGATAGTTTTTTATATAAAAAAGACAGTGTTGAAAGCGGTATGGAAAGAGCCATAAAATCAATTTTTCCTATACACGATCCACAAAACAGACTTAGTTTAGAATATGTTGATTATGAAATTTTAAAACCAAAATATTCAATTAGAGAATGCGTAGAAAGAGGATTGACCTACTCCGTAAGCTCAAAAATGAAAATCAGACTTGTTATTTATGATAAAGATGAAAAAACTGGGGAAAAAACAGGAATTAAAGAAATAAAAGAACAAGAGATATTTTTAAGAGATATTCCTTTAATGACTGATAGAGTTTCTTTTATCATAAACGGGGTTGAAAGAGTTGTTGTAAATCAACTTCATAGAAGTCCTGGTGTTATTTTTAAAGAAGAAGAGAGTCCAACAGTATCAAATAAAAGAATTTATACAGCACAAATAATACCAGATAGAGGTAGTTGGCTTTATTTTGAATATGATGCAAAAGATATTTTATATGTCCGTATAAATAATAAAAGAAAAATGCCTATAACTATTTTATTTAGGGCACTTGGATATGGAAAACAAGATATTATAAAACTTTTTTATCCTATAAAAACACTTCGTGTTGAAAAAGGTAAATTTTTAACAAAATTTGATCCAAAAGACTATACAACAAGGTTAGAATACGATATAAAAGATCCAAAAGGAAACATTGTTCATCAGTCTGGAAAAAGACTTACTCCAAGTAAGGCTAAAAAACTTATTGATGATGGTTTGGAATATGTAGAATATCCAATTGATATATTGCTTGAAAGATATCTTTTTGATCCTATTATAAATAATGAAAGTGGAGAAATTTTATACGATACTTTATCTTTGCTTGATGAAACAAAGATAGAAAAAATTTTAAAATCACAAAAAGAAATCACCATAATAAACGATCTTGCTGATGGTGTTGATAATAGTGTTATTAACTCATTTTTACAAGATGGTGATACCCTAAAAACGCTTCAACAACTTGAAAAAATAGATGATGAAAATGATCTTGCAGCAATTAGAATTTACAAAGTTATGCGTCCTGGTGAACCTGTTGTAAAAGAAGCAGCAAGAGAATTTGTAAATGATCTTTTCTTTAATCCAGAAAGATACGATTTAACAAAAGTTGGTCGTATGAAAATGAATCATAAACTTGGTATTGAAGTCCCTGAGTATGTAACTGTAATGACAAGTGAAGATATTATAAAAACTGCAAAATATCTAATTGGTGTTAAAAATGGAAAAGGTTTTATAGATGATAGAGATCATTTAGGAAATAGAAGAATTAGATCTATTGGAGAGCTTTTGGCAAATGAAACTCATTTAGGTCTTGTGAAAATGCAAAAAACTATAAGAGACAAATTTACAACACTTAGCAATAATGTAGATGAGTTAATGCCACATGATTTAGTAAATGCAAGAATTATA
PROTEIN sequence
Length: 513
MLNSLYSGNRLRVDFSKAKKEIDIPNLLQLQKKSFDSFLYKKDSVESGMERAIKSIFPIHDPQNRLSLEYVDYEILKPKYSIRECVERGLTYSVSSKMKIRLVIYDKDEKTGEKTGIKEIKEQEIFLRDIPLMTDRVSFIINGVERVVVNQLHRSPGVIFKEEESPTVSNKRIYTAQIIPDRGSWLYFEYDAKDILYVRINNKRKMPITILFRALGYGKQDIIKLFYPIKTLRVEKGKFLTKFDPKDYTTRLEYDIKDPKGNIVHQSGKRLTPSKAKKLIDDGLEYVEYPIDILLERYLFDPIINNESGEILYDTLSLLDETKIEKILKSQKEITIINDLADGVDNSVINSFLQDGDTLKTLQQLEKIDDENDLAAIRIYKVMRPGEPVVKEAAREFVNDLFFNPERYDLTKVGRMKMNHKLGIEVPEYVTVMTSEDIIKTAKYLIGVKNGKGFIDDRDHLGNRRIRSIGELLANETHLGLVKMQKTIRDKFTTLSNNVDELMPHDLVNARII