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NECEvent2014_5_3_scaffold_1992_3

Organism: NECEvent2014_5_3_Campylobacter_ureolyticus_rel_29_5_partial

partial RP 37 / 55 MC: 1 BSCG 30 / 51 ASCG 6 / 38 MC: 1
Location: comp(1945..3012)

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase D {ECO:0000256|HAMAP-Rule:MF_01082}; EC=5.4.99.27 {ECO:0000256|HAMAP-Rule:MF_01082};; tRNA pseudouridine(13) synthase {ECO:0000256|HAMAP-Rule:MF_01082}; tRNA pseudouridylat similarity UNIPROT
DB: UniProtKB
  • Identity: 98.0
  • Coverage: 355.0
  • Bit_score: 711
  • Evalue 4.30e-202
truD; tRNA pseudouridine synthase D (EC:5.4.99.-) similarity KEGG
DB: KEGG
  • Identity: 63.3
  • Coverage: 360.0
  • Bit_score: 465
  • Evalue 1.10e-128
tRNA pseudouridine synthase D n=1 Tax=Campylobacter ureolyticus ACS-301-V-Sch3b RepID=S3XRX3_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 98.0
  • Coverage: 355.0
  • Bit_score: 711
  • Evalue 3.00e-202
  • rbh

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Taxonomy

Campylobacter ureolyticus → Campylobacter → Campylobacterales → Epsilonproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1068
CATTCACCCATAAATGTACATTTTAGTAAAAATTCAGATGATTTTGTAGTTAGAGAAATTCCACTTTATGAATTTAGCGGTGAGGGTGAACACTTAATACTAAATATAGCCAAGAAAGGGCTTACAACTTTTGAGGCACTTCATATTTTAAGTGATTATTCAGGCGCTAAAATGAGGGATTTTGGATATGCGGGACTTAAAGACAAAGAGGGTTTTACAACTCAGTTTATCTCACTTCCTAAAAAATTTGAAAAAAACTTAGCAAATTTTTCTCACGAGAGTTTAAAAATAACTGATACTTTTACACATAAAAATAAACTTAGAATTGGCCATTTAAGCGGAAATAGTTTTTTTATAAGACTTAAAAAAGTTAGTGAGGTTGATGCTTTAAAGCTTAAAAATGCTCTTTTAAATTTGGATAAAAATGGCTATGCAAACTATTTTGGCTTTCAAAGATTTGGCAAATTTGAAGATAACGCAAAAGAGGGTGAGGAAATTTTAAGTGGAAATCTAAAGATTAAAAATCCAAAAATTAAAAATTTCTTAATTTCAGCTTATCAAAGTGAGCTTTTTAATAAATGGCTTAGTAAAAGAGTTGAGATTTCAAAATTTATCAGAGATTTTAATGAAAATGAAATAAATAAAATTTATGGATTTGATAAAGAGATTATAAAAGATTTAAAACTTCAACCCAATTTTTTCAAGCTTTTTAATGGCGATGTTTTAGGGCATTATCCACATGGAAAACTATTTTTATGCAAAGATTTAACAAGTGAGGTTGAAAGATTTTTAAAGCGTGATATTACTCCTTTTGGCTTACTTCCTGGAAATAAAGCTTTTCAAAGCGAAGATTTAGCAAAAAATATAGAAGATGAAATTTATCATCCTTCATTTAAATTTATTGAAAAAATGAATGGAAGTAGACGTTTTGCATGGTGTTTTTTAAAAAATGTTAGTTATAAATACACACCTGAATTAGCTCAATTTAGCATGAGTTTTGAACTTACAAAAGGAAGTTATGCAACTGTGGTTTTAAGAGAGATTTTACATAAAGAAATTTTTGATTAA
PROTEIN sequence
Length: 356
HSPINVHFSKNSDDFVVREIPLYEFSGEGEHLILNIAKKGLTTFEALHILSDYSGAKMRDFGYAGLKDKEGFTTQFISLPKKFEKNLANFSHESLKITDTFTHKNKLRIGHLSGNSFFIRLKKVSEVDALKLKNALLNLDKNGYANYFGFQRFGKFEDNAKEGEEILSGNLKIKNPKIKNFLISAYQSELFNKWLSKRVEISKFIRDFNENEINKIYGFDKEIIKDLKLQPNFFKLFNGDVLGHYPHGKLFLCKDLTSEVERFLKRDITPFGLLPGNKAFQSEDLAKNIEDEIYHPSFKFIEKMNGSRRFAWCFLKNVSYKYTPELAQFSMSFELTKGSYATVVLREILHKEIFD*