ggKbase home page

NECEvent2014_5_3_scaffold_2108_4

Organism: NECEvent2014_5_3_Campylobacter_ureolyticus_rel_29_5_partial

partial RP 37 / 55 MC: 1 BSCG 30 / 51 ASCG 6 / 38 MC: 1
Location: comp(1975..2850)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase similarity UNIPROT
DB: UniProtKB
  • Identity: 97.6
  • Coverage: 291.0
  • Bit_score: 544
  • Evalue 7.40e-152
rpoC; DNA-directed RNA polymerase, beta' subunit (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 80.1
  • Coverage: 291.0
  • Bit_score: 453
  • Evalue 4.50e-125
DNA-directed RNA polymerase subunit beta'''' n=1 Tax=Campylobacter ureolyticus RepID=UPI000368C049 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 291.0
  • Bit_score: 552
  • Evalue 1.90e-154

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Campylobacter ureolyticus → Campylobacter → Campylobacterales → Epsilonproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 876
ATAAAGCCAACTATTAGTGTTGTTACTGATAGCAAAACTCTGACTTATCAAATAGAGCCAAAAACTGTTATTTATGTATCAAATGGGCAAAAAGTAGCTTTGGCCGATACTTTAGCAAAAACTCCAAAAGCCGTAGCAAAATCAAGCGATATTACTGGAGGTCTTCCAAGGGTTAGTGAGCTTTTTGAAGCTAGAAAACCAAAAAATGCAGCTGTTATAGCTGAAATTGACGGTGTTGTTAAATTTGGAAAGGCACTTCGTTCAAAAGAAAAGATTATTATTGAATCTCCTGATGGTCTTGAGGTTGAACATACAATTGATAAATCTCTTCAAATCCAAGTAAGAGAAGGTGAGTTTGTTCATGCTGGTGAAAAGTTAACTGATGGACTCATAAGTAGCCAAGATGTTCTTAGAATTTTAGGTGAAAAAGCACTCCATCAATATCTAATAAGCGAGATTCAACAAGTTTATAGAAGCCAAGGTGTTGCTATTAATGACAAGCATATTGAGATTATTGTTTCTCAAATGTTAAGGCAAGTTAGTATTTTAGATAGTGGAAATACAAGCTTTATTGTAGGAGATTTAGTAAGTAGGCGTAAATTTAGGGCTGAGAACCAAAGAGTCATGAAAATGGGCGGTGAGCCAGCTATTGCAGAGCCTATTTTACTTGGTGTTACAAGAGCAGCTATTGGAAGCGATAGTTTTATTTCAGCTGCATCTTTCCAAGAAACCACTAAAGTTTTAACCGAGTCAAGTATTTCTGGCAAATTTGACTATCTAGAAGATTTGAAAGAAAATGTTATTTTAGGAAAGATGATTCCTGTTGGAACAGGACTTTATAAAAAAGATAAAGTTAAAATAAAATCTAATAAATAA
PROTEIN sequence
Length: 292
IKPTISVVTDSKTLTYQIEPKTVIYVSNGQKVALADTLAKTPKAVAKSSDITGGLPRVSELFEARKPKNAAVIAEIDGVVKFGKALRSKEKIIIESPDGLEVEHTIDKSLQIQVREGEFVHAGEKLTDGLISSQDVLRILGEKALHQYLISEIQQVYRSQGVAINDKHIEIIVSQMLRQVSILDSGNTSFIVGDLVSRRKFRAENQRVMKMGGEPAIAEPILLGVTRAAIGSDSFISAASFQETTKVLTESSISGKFDYLEDLKENVILGKMIPVGTGLYKKDKVKIKSNK*