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NECEvent2014_5_3_scaffold_184_33

Organism: NECEvent2014_5_3_Staphylococcus_epidermidis_32_10

near complete RP 49 / 55 MC: 2 BSCG 49 / 51 ASCG 12 / 38
Location: 19070..20017

Top 3 Functional Annotations

Value Algorithm Source
rpoA; DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 314.0
  • Bit_score: 604
  • Evalue 2.20e-170
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 314.0
  • Bit_score: 604
  • Evalue 1.10e-169
DNA-directed RNA polymerase subunit alpha n=76 Tax=Staphylococcus epidermidis RepID=RPOA_STAEQ similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 314.0
  • Bit_score: 604
  • Evalue 7.90e-170
  • rbh

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Taxonomy

Staphylococcus epidermidis → Staphylococcus → Bacillales → Bacilli → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 948
ATGATAGAAATTGAAAAACCTAGAATTGAGACAATTGAAGTTAGTGAAGATGCTAAATTCGGTAAATTCGTTGTTGAACCACTTGAACGTGGCTATGGTACTACACTAGGAAACTCCTTACGTCGTATCCTACTATCTTCATTACCAGGTGCAGCCGTAAAGTACATCGAGATTGAAGGAGTTTTACACGAATTTTCAGCAGTAGATAATGTAGTAGAAGATGTTTCAACAATCATTATGAACATTAAAAAACTTGCATTAAAAATTTACTCTGAAGAAGATAAAACTTTAGAAATTGATGTTAAAGATGAAGGCGAAGTAACTGCAAGTGACATTACTCACGACAGTGATGTTGAGATTTTAAATCCAGAGCTTAAAATCGCAACAGTGTCTAAAGGTGGACATCTTAAAGTGCGTCTTGTTGCTAATAAGGGTAGAGGTTACGCATTAGCTGAACAAAATAATACTAGTGATTTACCAATTGGTGTAATTCCTGTTGATTCACTATATTCACCTGTTGAACGTGTAAACTATACAGTTGAAAATACACGCGTAGGTCAAAGTAGTGATTTTGATAAATTAACTTTAGATGTTTGGACAAATGGTTCAATCACACCACAAGAGTCAGTATCATTAGCAGCTAAAATAATGACTGAACACTTGAATATCTTTGTAAGTCTAACTGATGAGGCTCAAAACGCTGAAATCATGATTGAAAAAGAAGAAGATCAAAAAGAAAAAGTACTTGAAATGTCTATTGAAGAATTAGACTTATCTGTACGTTCTTATAACTGCTTAAAACGCGCAGGAATCAATTCTGTACAAGAGTTAGCTGATAAATCTGAAGCTGACATGATGAAAGTGCGTAATTTAGGTCGTAAATCTCTAGAAGAAGTAAAATATAAATTAGAAGATTTAGGATTAGGATTAAGAAAAGAAGATTGATAA
PROTEIN sequence
Length: 316
MIEIEKPRIETIEVSEDAKFGKFVVEPLERGYGTTLGNSLRRILLSSLPGAAVKYIEIEGVLHEFSAVDNVVEDVSTIIMNIKKLALKIYSEEDKTLEIDVKDEGEVTASDITHDSDVEILNPELKIATVSKGGHLKVRLVANKGRGYALAEQNNTSDLPIGVIPVDSLYSPVERVNYTVENTRVGQSSDFDKLTLDVWTNGSITPQESVSLAAKIMTEHLNIFVSLTDEAQNAEIMIEKEEDQKEKVLEMSIEELDLSVRSYNCLKRAGINSVQELADKSEADMMKVRNLGRKSLEEVKYKLEDLGLGLRKED**