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NECEvent2014_5_3_scaffold_327_16

Organism: NECEvent2014_5_3_Staphylococcus_epidermidis_32_10

near complete RP 49 / 55 MC: 2 BSCG 49 / 51 ASCG 12 / 38
Location: comp(14503..14745)

Top 3 Functional Annotations

Value Algorithm Source
truA; tRNA pseudouridine(38-40) synthase (EC:5.4.99.12) similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 80.0
  • Bit_score: 165
  • Evalue 5.20e-39
tRNA pseudouridine synthase A {ECO:0000255|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000255|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000255|HAMAP-Rule:MF_00171}; tRNA pseudouridy similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 80.0
  • Bit_score: 165
  • Evalue 2.60e-38
tRNA pseudouridine synthase A n=3 Tax=Staphylococcus epidermidis RepID=H3VXW8_STAEP similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 80.0
  • Bit_score: 165
  • Evalue 1.80e-38

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Taxonomy

Staphylococcus epidermidis → Staphylococcus → Bacillales → Bacilli → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 243
TCTGGATTCCTTTATAATATGGTCCGTGTATTGGTAGCTTTCTTAATTGAAGTAGGAAAAGGAAAGCGTGAACCTAATGACGTCCCTAAGCTCTTAGAGGACAAAAATAGAAATAATGTGCCTCTCACAGCTCCACCTGACGGATTATATTTAGAAAAGATTTATTTAAGCCCAGAAGAATTGATACAAGAATATGGGAAAGATATAAAAATACACTACAAAAAATCGTTGGAAAAACACTAA
PROTEIN sequence
Length: 81
SGFLYNMVRVLVAFLIEVGKGKREPNDVPKLLEDKNRNNVPLTAPPDGLYLEKIYLSPEELIQEYGKDIKIHYKKSLEKH*