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NECEvent2014_5_3_scaffold_3567_2

Organism: NECEvent2014_5_3_Staphylococcus_epidermidis_32_10

near complete RP 49 / 55 MC: 2 BSCG 49 / 51 ASCG 12 / 38
Location: comp(962..1687)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Campylobacter ureolyticus RepID=UPI000370A36E similarity UNIREF
DB: UNIREF100
  • Identity: 95.9
  • Coverage: 241.0
  • Bit_score: 465
  • Evalue 3.40e-128
  • rbh
ABC transporter substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 34.5
  • Coverage: 252.0
  • Bit_score: 149
  • Evalue 1.20e-33
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KGA41479.1}; TaxID=78398 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pectobacterium.;" so similarity UNIPROT
DB: UniProtKB
  • Identity: 34.5
  • Coverage: 252.0
  • Bit_score: 148
  • Evalue 1.30e-32

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Taxonomy

Pectobacterium carotovorum → Pectobacterium → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 726
CATTCACACGGACATTCTCATGAGCACGAAAGTGAGCATTTACACGAAAATCATCACGATGATCACCTCACAATTGTAAATAACCTTGATAGTGATGATATCAACCATACTAACGAAACTAACAAACAAACTCACAATAAACATATCAATAACCACGATAAAACCGAACTAACAGATACTAACAAGTTAGGAATTCCAGCAATTGTTGTAAAACCTATTAGTTTTATAGCAGCGTATCAACTAAGGCAAGATTATAAAAATAAAGATGATACAATAGCTGTTTTTCCAGGTGAAATTTTAGCGTGGCTTTACTCACTTTTAGGCGATACAAAAAGTTGGCTTTTAGCCATTTCAACCTCACTTCAAGTTTTAGCCTTTATGCTTGTTTTTGGACTTTCATTTTTGTTTATAAACCAAAAAAAGGCTATGATAATTGAACTTAGAGTTTTTGGTGCAAATGTGTTTAGAATAATGATATATGTATGGGCACAACTAATTAGCATAATTTTATCGGGCATAATAATTGGCACTATTTTAGGGTTTTTGCTAACCAAAGTAGTATCTTCTATACTCGGAGATAAACTTGGATTTAGCTTGATAACTAAATTTGAATGTAGTGATTTTGTATTTTTAGCTTTCGTATTTTTAGTTTCAGCTGTGCTTTGTTTTATACCCGTTATTAAAATTTATAAAATTTCAGTTGCAGACTCCTTAAAAGATAACTAA
PROTEIN sequence
Length: 242
HSHGHSHEHESEHLHENHHDDHLTIVNNLDSDDINHTNETNKQTHNKHINNHDKTELTDTNKLGIPAIVVKPISFIAAYQLRQDYKNKDDTIAVFPGEILAWLYSLLGDTKSWLLAISTSLQVLAFMLVFGLSFLFINQKKAMIIELRVFGANVFRIMIYVWAQLISIILSGIIIGTILGFLLTKVVSSILGDKLGFSLITKFECSDFVFLAFVFLVSAVLCFIPVIKIYKISVADSLKDN*