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NECEvent2014_5_3_scaffold_50

Alias: 175_002_scaffold_50

Search features with annotation key words

Displaying items 61-84 of 84 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_5_3_scaffold_50_60
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(40002..40187)
DNA (186bp) protein (62aa)
DNA-binding helix-turn-helix protein n=1 Tax=Finegoldia magna SY403409CC001050417 RepID=F9N0C0_FINMA
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EGS34159.1}; TaxID=866779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldia.;" source="Finegoldia magna SY40
NECEvent2014_5_3_scaffold_50_61
RBG_16_Chloroflexi_52_11_curated, Chloroflexi, Bacteria

Not on your lists

40263..40496
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221) RepID=L0G351_ECHVK
hypothetical protein Tax=RBG_16_Chloroflexi_52_11_curated
hypothetical protein
NECEvent2014_5_3_scaffold_50_62
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(40493..40708)
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=Finegoldia magna BVS033A4 RepID=E1KW21_FINMA
Uncharacterized protein {ECO:0000313|EMBL:EFL54628.1}; TaxID=866773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldia.;" source="Finegoldia magna BVS033A4.;"
NECEvent2014_5_3_scaffold_50_63
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(41088..41249)
DNA (162bp) protein (54aa)
Putative uncharacterized protein n=1 Tax=Finegoldia magna SY403409CC001050417 RepID=F9N0C3_FINMA
Putative uncharacterized protein {ECO:0000313|EMBL:EGS34221.1}; TaxID=866779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldia.;" source="Finegoldia magna SY403409
NECEvent2014_5_3_scaffold_50_64
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

41399..41884
DNA (486bp) protein (162aa)
DNA-binding helix-turn-helix protein n=1 Tax=Finegoldia magna BVS033A4 RepID=E1KW23_FINMA
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EFL54704.1}; TaxID=866773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldia.;" source="Finegoldia magna BVS0
cI repressor
NECEvent2014_5_3_scaffold_50_65
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

41877..42293
DNA (417bp) protein (139aa)
Putative uncharacterized protein n=1 Tax=Finegoldia magna SY403409CC001050417 RepID=F9N0C5_FINMA
Putative uncharacterized protein {ECO:0000313|EMBL:EGS34197.1}; TaxID=866779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldia.;" source="Finegoldia magna SY403409
putative Zn peptidase
NECEvent2014_5_3_scaffold_50_66
Parvimonas micra, Parvimonas, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

42431..43120
DNA (690bp) protein (230aa)
Uncharacterized protein n=1 Tax=Parvimonas micra ATCC 33270 RepID=A8SKK4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDP24128.1}; TaxID=411465 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Parvimonas.;" source="Parvimonas micra ATCC 33270.;"
PemK-like protein.
NECEvent2014_5_3_scaffold_50_67
Fusobacterium nucleatum, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

43415..44845
DNA (1431bp) protein (477aa)
Uncharacterized protein n=2 Tax=Fusobacterium nucleatum RepID=H1HI34_FUSNU rbh
recombinase
Uncharacterized protein {ECO:0000313|EMBL:EHO76111.1}; TaxID=999414 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium nucleatum subsp. animalis
NECEvent2014_5_3_scaffold_50_trna_4
unknown

Not on your lists

comp(44827..44907)
DNA (81bp)
transferRNA
NECEvent2014_5_3_scaffold_50_trna_3
unknown

Not on your lists

comp(44914..44987)
DNA (74bp)
transferRNA
NECEvent2014_5_3_scaffold_50_68
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(45113..45802)
DNA (690bp) protein (230aa)
Thermonuclease {ECO:0000313|EMBL:EFH92413.1}; EC=3.1.31.1 {ECO:0000313|EMBL:EFH92413.1};; TaxID=525282 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldia.;" source=
Thermonuclease n=1 Tax=Finegoldia magna ATCC 53516 RepID=D6SAB3_FINMA rbh
thermonuclease
NECEvent2014_5_3_scaffold_50_69
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(45822..46496)
DNA (675bp) protein (225aa)
Endo-beta-N-acetylglucosaminidase n=1 Tax=Finegoldia magna (strain ATCC 29328) RepID=B0S121_FINM2 rbh
endo-beta-N-acetylglucosaminidase
Endo-beta-N-acetylglucosaminidase {ECO:0000313|EMBL:BAG08061.1}; TaxID=334413 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldia.;" source="Finegoldia magna (strain
NECEvent2014_5_3_scaffold_50_trna_2
unknown

Not on your lists

46613..46685
DNA (73bp)
transferRNA
NECEvent2014_5_3_scaffold_50_70
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

46720..47607
DNA (888bp) protein (296aa)
EDD domain protein, DegV family n=1 Tax=Finegoldia magna ATCC 53516 RepID=D6SAB1_FINMA rbh
EDD domain protein, DegV family {ECO:0000313|EMBL:EFH92411.1}; TaxID=525282 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldia.;" source="Finegoldia magna ATCC 5351
hypothetical protein
NECEvent2014_5_3_scaffold_50_71
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(47624..48544)
DNA (921bp) protein (307aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=525282 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldi
Pseudouridine synthase n=1 Tax=Finegoldia magna ATCC 53516 RepID=D6SAB0_FINMA rbh
pseudouridylate synthase
NECEvent2014_5_3_scaffold_50_72
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(48544..49221)
DNA (678bp) protein (226aa)
Uracil-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00148, ECO:0000256|RuleBase:RU003780}; Short=UDG {ECO:0000256|HAMAP-Rule:MF_00148};; EC=3.2.2.27 {ECO:0000256|HAMAP-Rule:MF_00148, ECO:0000256|RuleBas
Uracil-DNA glycosylase n=1 Tax=Finegoldia magna ATCC 53516 RepID=D6SAA9_FINMA rbh
uracil-DNA glycosylase
NECEvent2014_5_3_scaffold_50_73
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(49221..49667)
DNA (447bp) protein (149aa)
Lipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594}; EC=3.4.23.36 {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594};; Prolipoprotein signal pep
Lipoprotein signal peptidase n=1 Tax=Finegoldia magna ATCC 53516 RepID=D6SAA8_FINMA
lipoprotein signal peptidase
NECEvent2014_5_3_scaffold_50_74
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(49676..50383)
DNA (708bp) protein (236aa)
S4 domain protein n=1 Tax=Finegoldia magna ATCC 53516 RepID=D6SAA7_FINMA rbh
S4 domain protein {ECO:0000313|EMBL:EFH92407.1}; TaxID=525282 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldia.;" source="Finegoldia magna ATCC 53516.;"
putative RNA binding protein
NECEvent2014_5_3_scaffold_50_75
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(50343..50444)
DNA (102bp) protein (34aa)
S4 domain protein n=1 Tax=Finegoldia magna ATCC 53516 RepID=D6SAA7_FINMA
putative RNA binding protein
Putative uncharacterized protein {ECO:0000313|EMBL:EGS32295.1}; TaxID=866779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldia.;" source="Finegoldia magna SY403409
NECEvent2014_5_3_scaffold_50_76
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(50446..50718)
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Finegoldia magna ATCC 53516 RepID=D6SAA6_FINMA
Uncharacterized protein {ECO:0000313|EMBL:EFH92406.1}; TaxID=525282 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldia.;" source="Finegoldia magna ATCC 53516.;"
hypothetical protein; K02221 YggT family protein
NECEvent2014_5_3_scaffold_50_77
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(50715..51200)
DNA (486bp) protein (162aa)
Cell division protein SepF n=1 Tax=Finegoldia magna ATCC 53516 RepID=D6SAA5_FINMA rbh
Cell division protein SepF {ECO:0000256|HAMAP-Rule:MF_01197}; TaxID=525282 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldia.;" source="Finegoldia magna ATCC 53516
hypothetical protein
NECEvent2014_5_3_scaffold_50_78
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(51210..51890)
DNA (681bp) protein (227aa)
Pyridoxal phosphate enzyme, YggS family n=1 Tax=Finegoldia magna ATCC 53516 RepID=D6SAA4_FINMA rbh
Pyridoxal phosphate enzyme, YggS family {ECO:0000313|EMBL:EFH92404.1}; TaxID=525282 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldia.;" source="Finegoldia magna A
putative proline synthetase associated protein
NECEvent2014_5_3_scaffold_50_79
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(51890..53047)
DNA (1158bp) protein (386aa)
Uncharacterized protein n=1 Tax=Finegoldia magna ATCC 53516 RepID=D6SAA3_FINMA rbh
Uncharacterized protein {ECO:0000313|EMBL:EFH92403.1}; TaxID=525282 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldia.;" source="Finegoldia magna ATCC 53516.;"
hypothetical protein
NECEvent2014_5_3_scaffold_50_80
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(53085..54044)
DNA (960bp) protein (320aa)
Peptidase, U32 family {ECO:0000313|EMBL:EFH92402.1}; EC=3.4.-.- {ECO:0000313|EMBL:EFH92402.1};; TaxID=525282 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldia.;" s
Peptidase, U32 family n=1 Tax=Finegoldia magna ATCC 53516 RepID=D6SAA2_FINMA rbh
collagenase family protease
Displaying items 61-84 of 84 in total

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