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NECEvent2014_5_3_scaffold_580_12

Organism: NECEvent2014_5_3_Pseudomonas_aeruginosa_rel_66_7

near complete RP 49 / 55 MC: 3 BSCG 43 / 51 ASCG 13 / 38 MC: 2
Location: comp(6378..7097)

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=2 Tax=Pseudomonas aeruginosa RepID=U8QPK5_PSEAI similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 239.0
  • Bit_score: 494
  • Evalue 5.10e-137
  • rbh
Repressor protein cI {ECO:0000313|EMBL:ETD57003.1}; TaxID=1431713 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aerugino similarity UNIPROT
DB: UniProtKB
  • Identity: 51.1
  • Coverage: 223.0
  • Bit_score: 228
  • Evalue 9.60e-57
repressor protein cI similarity KEGG
DB: KEGG
  • Identity: 47.5
  • Coverage: 223.0
  • Bit_score: 198
  • Evalue 2.10e-48

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Taxonomy

Pseudomonas aeruginosa → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 720
ATGCAGACACTTCAAGAACGACTCAAGATCGCAATGGCGGGGCCGCCCAGGGTTTCTCAGGCGGCTCTTGCGCGCGCCTGTCATATCACCGCGCCATCGGTAAATGACTGGATCTCAGGAAAGACAAAAAGCATCGAGGGAGAGAATCTCCTCAATGCTGCGGCATTTCTGAAAGTCAGCCCTCTGTGGCTGGCAACGGGAAAAGGCCCTATGCGCGAGCACGCACCAACAGGCAGGGACAATCCGGAGCAGGCTGGTAGTGCACAAAGCGAGCATGCCAATGTGATCCCAGTGGCTACGCCCCCAAGGAAAAGGAATAAGTATCCAGTGATCAGTTGGGTCAGGGCTGGGGACTGGGCCGAAAGTCCGGACAATTTTCAGCCTGGCGATGCAGATGAATGGCTGGAGTCGGAAGAAAAGGCTGGCCCACATGGATATTGGCTTGTAATTAACGGCGACTCGATGACGCCACTATTCCCGCAAGGGAGTCGAATATTAATACAACCCGAAGGGTTCGACCTAATCAGCGGAAAATACTACGTTGCGGTTTGCTACGAGCCTGGGAAAAAACGCGATACAACGGTGAAACAGTATGTTAGGGATGCTGGGTTCGAGTATCTAAAACCTATCAACCCCGTATACCGAACTCTTGAGGTGAGCGACACGGTTCGAATCATAGGTCGCGTGGTTGACTATAAGCTTCCTGCTGGCGTTTTGTAG
PROTEIN sequence
Length: 240
MQTLQERLKIAMAGPPRVSQAALARACHITAPSVNDWISGKTKSIEGENLLNAAAFLKVSPLWLATGKGPMREHAPTGRDNPEQAGSAQSEHANVIPVATPPRKRNKYPVISWVRAGDWAESPDNFQPGDADEWLESEEKAGPHGYWLVINGDSMTPLFPQGSRILIQPEGFDLISGKYYVAVCYEPGKKRDTTVKQYVRDAGFEYLKPINPVYRTLEVSDTVRIIGRVVDYKLPAGVL*