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NECEvent2014_5_3_scaffold_618_1

Organism: NECEvent2014_5_3_Pseudomonas_aeruginosa_rel_66_7

near complete RP 49 / 55 MC: 3 BSCG 43 / 51 ASCG 13 / 38 MC: 2
Location: 2..820

Top 3 Functional Annotations

Value Algorithm Source
RNA-splicing ligase RtcB {ECO:0000256|RuleBase:RU371113}; EC=6.5.1.- {ECO:0000256|RuleBase:RU371113, ECO:0000313|EMBL:CKI14179.1};; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Ps similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 272.0
  • Bit_score: 552
  • Evalue 2.50e-154
Protein rtcB n=9 Tax=Pseudomonas aeruginosa RepID=U8AM19_PSEAI similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 272.0
  • Bit_score: 552
  • Evalue 1.80e-154
RNA-2',3'-PO4:RNA-5'-OH ligase similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 272.0
  • Bit_score: 552
  • Evalue 5.10e-155

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Taxonomy

Pseudomonas aeruginosa → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 819
GCCTGGAAGGCGCTCGCCGGTCGCTTCAAGGCGATCACCGACAAGCACCCGAGGCTGGAGAAGACCAACAACCGCCAGCACCTGGGAACCCTCGGCACCGGCAACCACTTCATCGAGGTCTGCCTGGACGAGGCCGACCGCGTCTGGTTCATGCTGCACAGCGGTTCGCGCGGGGTCGGCAACGCCATCGGCAACCTGTTCATCGAACTGGCCAAGGCGGACATGCGCCAGCACATCGCCAACCTGCCGGACAAGGACCTGGCCTACTTCGAGGAAGGCAGCCGGCACTTCGACGACTACGTGGAAGCGGTCGGCTGGGCCCAGGATTTCGCCCGGCAGAACCGCGCGCTGATGATGCACGCGGTGATCGAGGCGGCGCGCCAGGTGATCCGCAAGCCGTTCGAAGCCAACCTGGAGGCGGTCGATTGCCACCACAACTACGTGCAGAAGGAGCGCCACTTCGGCCAGGAGGTACTGGTCACCCGCAAAGGCGCGGTGTCCGCGCAGAAGGGCCAGCTCGGCATCATTCCCGGCTCGATGGGGGCGAAGAGCTTCATCGTCCGCGGCCTCGGCAACCAGGAAGCGTTCTGCTCGTGCAGCCACGGCGCCGGGCGGACCATGAGCCGGACCAAGGCGAAGAAGGTCTTCAGCGTCGCCGACCAGGCGCGCGCCACCGCCCACGTCGAATGCCGCAAGGACGCCGACGTGATCGACGAGATCCCGATGGCCTACAAGGACATCGACCGGGTCATGGAAGCCCAGCGCGAGCTGGTGGAAGTGCTGCACACCCTGCGTCAGGTGGTGTGCGTGAAAGGATGA
PROTEIN sequence
Length: 273
AWKALAGRFKAITDKHPRLEKTNNRQHLGTLGTGNHFIEVCLDEADRVWFMLHSGSRGVGNAIGNLFIELAKADMRQHIANLPDKDLAYFEEGSRHFDDYVEAVGWAQDFARQNRALMMHAVIEAARQVIRKPFEANLEAVDCHHNYVQKERHFGQEVLVTRKGAVSAQKGQLGIIPGSMGAKSFIVRGLGNQEAFCSCSHGAGRTMSRTKAKKVFSVADQARATAHVECRKDADVIDEIPMAYKDIDRVMEAQRELVEVLHTLRQVVCVKG*