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NECEvent2014_5_3_scaffold_822_3

Organism: NECEvent2014_5_3_Pseudomonas_aeruginosa_rel_66_7

near complete RP 49 / 55 MC: 3 BSCG 43 / 51 ASCG 13 / 38 MC: 2
Location: comp(2477..3736)

Top 3 Functional Annotations

Value Algorithm Source
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=1431713 speci similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 419.0
  • Bit_score: 819
  • Evalue 1.70e-234
Transcription termination factor Rho n=134 Tax=Pseudomonas RepID=RHO_PSEAE similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 419.0
  • Bit_score: 819
  • Evalue 1.20e-234
  • rbh
rho; transcription termination factor Rho similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 419.0
  • Bit_score: 819
  • Evalue 3.40e-235

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Taxonomy

Pseudomonas aeruginosa → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1260
ATGAATCTGACCGAACTCAAGCAAAAGCCGATTGCCGAACTGCTGGAAATGTCCGATGCCATGGGCCTGGAAAACATGGCCCGTTCGCGCAAGCAGGACATCATCTTCGCCCTGCTGAAGAAGCACGCGAAAAGTGGTGAAGAGATCTCCGGCGATGGCGTGCTGGAGATTCTTCAGGACGGCTTCGGCTTCCTGCGCTCCGCCGACTCTTCCTACCTGGCCGGCCCCGACGACATCTATGTCTCGCCGAGCCAGATCCGGCGCTTCAACCTGCGCACGGGCGACACCATCATCGGCAAGATCCGGCCGCCGAAAGAGGGCGAGCGTTACTTCGCCCTGCTCAAGGTCGACTCGATCAACTTCGATCGTCCGGAGAATGCGAAGAACAAGATTCTCTTCGAGAACCTGACGCCGCTGTTCCCCAACGAGCGGATGAAGATGGAAGCCGGCAACGGCTCCACCGAAGACCTGACCGGCCGCGTCATCGATCTCTGCGCGCCGATCGGCAAGGGCCAGCGCGGCCTGATCGTGGCGCCGCCGAAGGCGGGCAAGACCATCATGCTGCAGAACATCGCCAGCAACATCACCCGCAACAACCCCGAATGCCACCTGATCGTACTGCTGATCGACGAGCGCCCTGAGGAAGTGACCGAAATGCAGCGCACCGTGCGCGGCGAAGTGGTCGCCTCGACCTTTGACGAACCGCCGACCCGTCACGTACAGGTCGCCGAGATGGTGATCGAGAAGGCCAAGCGCCTGGTCGAGCACAAGAAGGACGTGGTCATCCTGCTCGACTCCATCACCCGTCTGGCGCGGGCCTACAACACCGTGATCCCCAGCTCCGGCAAGGTGCTCACCGGCGGTGTCGACGCCCATGCCCTGGAGAAGCCGAAGCGCTTCTTCGGCGCCGCGCGGAATATCGAAGAGGGCGGTTCTCTTACGATTCTCGCCACGGCGTTGGTGGAAACCGGCTCGAAGATGGACGAGGTGATCTACGAGGAGTTCAAGGGTACCGGCAACATGGAACTCCCATTGGATCGCAAGATCGCCGAGAAGCGCGTGTTCCCGGCCATCAACATCAACCGTTCGGGTACCCGCCGCGAAGAGCTGCTGACCAGCGAGGACGAGCTCCAGCGCATGTGGATCCTGCGCAAGATCCTGCACCCGATGGACGAGATCTCCGCGATCGAATTCCTCATCGACAAGCTCAAGCAGACCAAGACCAACGATGAGTTCTTCGATTCGATGAAACGAAAGTAG
PROTEIN sequence
Length: 420
MNLTELKQKPIAELLEMSDAMGLENMARSRKQDIIFALLKKHAKSGEEISGDGVLEILQDGFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDTIIGKIRPPKEGERYFALLKVDSINFDRPENAKNKILFENLTPLFPNERMKMEAGNGSTEDLTGRVIDLCAPIGKGQRGLIVAPPKAGKTIMLQNIASNITRNNPECHLIVLLIDERPEEVTEMQRTVRGEVVASTFDEPPTRHVQVAEMVIEKAKRLVEHKKDVVILLDSITRLARAYNTVIPSSGKVLTGGVDAHALEKPKRFFGAARNIEEGGSLTILATALVETGSKMDEVIYEEFKGTGNMELPLDRKIAEKRVFPAININRSGTRREELLTSEDELQRMWILRKILHPMDEISAIEFLIDKLKQTKTNDEFFDSMKRK*