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NECEvent2014_5_3_scaffold_1755_4

Organism: NECEvent2014_5_3_Pseudomonas_aeruginosa_rel_66_7

near complete RP 49 / 55 MC: 3 BSCG 43 / 51 ASCG 13 / 38 MC: 2
Location: comp(2036..2554)

Top 3 Functional Annotations

Value Algorithm Source
Type II secretion system protein H n=95 Tax=Pseudomonas RepID=GSPH_PSEAE similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 172.0
  • Bit_score: 332
  • Evalue 3.20e-88
  • rbh
General secretion pathway protein H similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 172.0
  • Bit_score: 332
  • Evalue 9.00e-89
General secretion pathway protein H {ECO:0000313|EMBL:ETD45524.1}; TaxID=1431713 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseud similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 172.0
  • Bit_score: 332
  • Evalue 4.50e-88

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Taxonomy

Pseudomonas aeruginosa → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 519
ATGCGGGCTTCGCGCGGCTTCACCCTCATCGAGCTGATGGTGGTGATGGTCATCATCAGCGTACTGATCGGCCTGGCGGTGCTCAGCACCGGCTTCGCCAGCACCTCGCGGGAGCTGGACAGCGAGGCCGAGCGGCTCGCCGGGCTGATCGGCGTGCTGACCGACGAGGCCGTGCTGGACAACCGCGAGTACGGCCTGCGCCTGGAGCGCGATGCCTACCAGGTACTGCGCTACGACGAAGCGAAGGCGCGCTGGTTGCCGGTGGCGCGCGACAGCCACCGCCTGCCGGAGTGGGCGGAGCTGACCTTCGAGCTGGACGGCCAGCCGCTGGTGCTGGCCGGCAGCAAGGGCGAGAAGGAGCAGAAGAAAGGCACCGACCAGCCGCAATTGCTGATCCTCTCCAGTGGCGAACTCAGTCCGTTCCGCCTGCGCCTGGCCGAGCGCGGACCCGAGGGGCGGGCGTTGTCGCTGAGCAGCGACGGTTTCCGCCTGCCACGGGTCGAGGTGGCGCGGCGATGA
PROTEIN sequence
Length: 173
MRASRGFTLIELMVVMVIISVLIGLAVLSTGFASTSRELDSEAERLAGLIGVLTDEAVLDNREYGLRLERDAYQVLRYDEAKARWLPVARDSHRLPEWAELTFELDGQPLVLAGSKGEKEQKKGTDQPQLLILSSGELSPFRLRLAERGPEGRALSLSSDGFRLPRVEVARR*