ggKbase home page

NECEvent2014_5_3_scaffold_1800_4

Organism: NECEvent2014_5_3_Pseudomonas_aeruginosa_rel_66_7

near complete RP 49 / 55 MC: 3 BSCG 43 / 51 ASCG 13 / 38 MC: 2
Location: comp(1863..3308)

Top 3 Functional Annotations

Value Algorithm Source
TonB-dependent receptor n=3 Tax=Pseudomonas aeruginosa RepID=U8RCI9_PSEAI similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 481.0
  • Bit_score: 984
  • Evalue 4.30e-284
  • rbh
TonB-denpendent receptor similarity KEGG
DB: KEGG
  • Identity: 99.8
  • Coverage: 481.0
  • Bit_score: 983
  • Evalue 2.70e-284
TonB-dependent receptor {ECO:0000313|EMBL:CKH47117.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginos similarity UNIPROT
DB: UniProtKB
  • Identity: 99.6
  • Coverage: 481.0
  • Bit_score: 981
  • Evalue 3.90e-283

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pseudomonas aeruginosa → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1446
ACCTTCGCCAAGCTCAACTTCAGGCCCGACGCCGACAGCCGCCTGGCGCTGATCTACAGCAGCCTGGAACAGAACGACACTGAAGATCCGCTGGGGCAGACCTGGGACGCCTACAAGCACGACCCGCGCTCCGTCACCGCCAACGCCGAGCTGTACGACACGCGCAAGAGCATCGACCACCAGCAGGCCGGGATGAACTACGAGCGCTACTTCGGCGAGGCGACCTTGCAGGTCAACGCCTACGTGGGCAAGCGCAGTGTCGTGCAGTATCTGTCGATCCCCAGGGGGGTGGCCTCCAACAGTCAGCGTGGCGGCGGCGTGGTGGACTTCGACCGCGACTTCCACGGTGGCACCGTGCGCTGGCTGCAACCGGTACGCCAGGCGCCGGGCGTGCTGAACCTGACCGTCGGCCTCGACTACGACCAGAGCCGCGACGACCGTCGCGGCTACCAGAACTTCAACGGCGACCAGCTCGGCGTGAAGGGCGAGTTGCGCCGCGACGAGGTGGACACCGCCACCAGCCTCGATCCCTACCTGCAGGCGAGCTGGGCCATCGACGCCTGGACCCTGCAGGCCGGGGTGCGCCACAGCACCATGAAGATGGAGGTCGACGACCGCTACCTGAGCAACGGCGATGCCAGCGGCTCGCGGCGCTACCGGAAGAACACCCCGTCGTTCTCGGTGATGTACGCCTTCACCCCCGACCTGCACGGCTACCTCAGCGCCGGCAAGGGCTTCGAGACTCCGACCCAGGCGGAGATGGCCTATGCGCCGGTGGCGGCGAACGCGCCGGACGTCTTCAACTTCGGCCTCAAGCCAGCCACCAGCAGCCAGTACGAAGCCGGGCTGAAGGCGCGCCTGTGGGGCAATACGCGGGTCAACGCGGCGATCTTCCAGATCCGCACCGAGGACGAGATCGTCGTCGCCAGCTCCCTCGGCGGTCGCACCAGCTACCAGAACGCCGGCAAGACCCTGCGTCGCGGCTTCGAACTGGGCCTGGAGAGCGAACTGAGCGAGCACTGGAACGCCAACCTGGCCTATACCCGGCTATCCGCCACCTACGATTCGGATTTCAAGGCCGGCGGCAAGACCATCGGCAAGGGCAAGCACCTGCCGGGCGTGCCGGAAAGCAGCCTGTTCGGCGAACTGGTGTGGAAGCCCGCGGAGGGCATCAGCATGGGCTGGGAAGGCATGTACCGCAGCCAGGTCTACGTCGAGGACAGCAACAGCGAAAAGGCCGCGCCGAGCTATGCGGTATTCAACTGGCGCACCCGCTTCGAGCAGCGCCTGGGAGCCTGGGCCTTCCACCAGCTGGTGCGCCTGGACAACCTGTTCGACCGCCAGTACGTCGGCTCGGTCATCGTCGGCGACGGCAACCGGCGTTACTACGAAGCGGCCCCCGGGCTGTCCTGGTACGCGGGAGCCGGGGTCGAATACCAGTTCTGA
PROTEIN sequence
Length: 482
TFAKLNFRPDADSRLALIYSSLEQNDTEDPLGQTWDAYKHDPRSVTANAELYDTRKSIDHQQAGMNYERYFGEATLQVNAYVGKRSVVQYLSIPRGVASNSQRGGGVVDFDRDFHGGTVRWLQPVRQAPGVLNLTVGLDYDQSRDDRRGYQNFNGDQLGVKGELRRDEVDTATSLDPYLQASWAIDAWTLQAGVRHSTMKMEVDDRYLSNGDASGSRRYRKNTPSFSVMYAFTPDLHGYLSAGKGFETPTQAEMAYAPVAANAPDVFNFGLKPATSSQYEAGLKARLWGNTRVNAAIFQIRTEDEIVVASSLGGRTSYQNAGKTLRRGFELGLESELSEHWNANLAYTRLSATYDSDFKAGGKTIGKGKHLPGVPESSLFGELVWKPAEGISMGWEGMYRSQVYVEDSNSEKAAPSYAVFNWRTRFEQRLGAWAFHQLVRLDNLFDRQYVGSVIVGDGNRRYYEAAPGLSWYAGAGVEYQF*