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NECEvent2014_5_3_scaffold_1074_4

Organism: NECEvent2014_5_3_Pseudomonas_aeruginosa_rel_66_7

near complete RP 49 / 55 MC: 3 BSCG 43 / 51 ASCG 13 / 38 MC: 2
Location: 3638..4351

Top 3 Functional Annotations

Value Algorithm Source
Quorum-sensing control repressor n=105 Tax=Pseudomonas RepID=B7VAX6_PSEA8 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 237.0
  • Bit_score: 483
  • Evalue 1.50e-133
  • rbh
LuxR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 237.0
  • Bit_score: 483
  • Evalue 4.30e-134
LuxR family transcriptional regulator {ECO:0000313|EMBL:AKE70396.1}; PhzR {ECO:0000313|EMBL:AAF01471.1}; Quorum-sensing control repressor {ECO:0000313|EMBL:CEI20178.1}; Quorum-sensing control represso similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 237.0
  • Bit_score: 483
  • Evalue 2.20e-133

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Taxonomy

Pseudomonas aeruginosa → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 714
ATGCATGATGAGAGAGAGGGATATCTCGAGATTTTGTCAAGAATAACAACCGAGGAAGAGTTCTTCTCCCTGGTTCTCGAGATATGCGGTAATTATGGATTCGAATTCTTTTCATTCGGTGCGCGGGCGCCTTTCCCGCTGACCGCGCCTAAATATCATTTCCTGTCCAATTACCCAGGGGAATGGAAAAGCAGATATATCTCCGAAGACTACACATCCATCGACCCGATCGTGCGCCATGGTCTCCTGGAATACACCCCGCTGATCTGGAATGGCGAAGACTTCCAGGAGAACCGTTTCTTCTGGGAGGAAGCGCTGCATCACGGCATCCGTCACGGCTGGTCGATCCCGGTCCGCGGCAAGTACGGGCTGATCAGCATGCTGTCCCTGGTGCGTTCCAGCGAGAGCATCGCCGCTACGGAAATCTTGGAGAAGGAATCCTTCCTGCTCTGGATCACCAGCATGCTGCAGGCTACCTTCGGCGACCTGCTGGCGCCGCGCATCGTCCCGGAAAGCAATGTGCGCCTGACCGCCAGGGAAACCGAGATGCTCAAGTGGACCGCGGTGGGCAAGACCTACGGCGAGATCGGCCTGATCCTGTCGATCGACCAGCGCACGGTGAAGTTCCATATCGTCAATGCGATGCGCAAGCTCAACTCCAGCAACAAGGCGGAGGCCACCATGAAGGCTTACGCCATCGGCCTGCTCAACTGA
PROTEIN sequence
Length: 238
MHDEREGYLEILSRITTEEEFFSLVLEICGNYGFEFFSFGARAPFPLTAPKYHFLSNYPGEWKSRYISEDYTSIDPIVRHGLLEYTPLIWNGEDFQENRFFWEEALHHGIRHGWSIPVRGKYGLISMLSLVRSSESIAATEILEKESFLLWITSMLQATFGDLLAPRIVPESNVRLTARETEMLKWTAVGKTYGEIGLILSIDQRTVKFHIVNAMRKLNSSNKAEATMKAYAIGLLN*