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NECEvent2014_5_3_scaffold_1075_1

Organism: NECEvent2014_5_3_Pseudomonas_aeruginosa_rel_66_7

near complete RP 49 / 55 MC: 3 BSCG 43 / 51 ASCG 13 / 38 MC: 2
Location: comp(2..772)

Top 3 Functional Annotations

Value Algorithm Source
Nucleotide sugar epimerase/dehydratase WbpM n=19 Tax=Pseudomonas RepID=S0IRQ4_PSEAI similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 257.0
  • Bit_score: 507
  • Evalue 6.30e-141
Similar to N terminal coding region of Polysaccharide biosynthesis protein WpbM {ECO:0000313|EMBL:AAM27552.1}; Flags: Fragment;; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseud similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 257.0
  • Bit_score: 507
  • Evalue 8.80e-141
membrane protein similarity KEGG
DB: KEGG
  • Identity: 99.6
  • Coverage: 257.0
  • Bit_score: 506
  • Evalue 5.20e-141

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Taxonomy

Pseudomonas aeruginosa → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 771
ATGATAGATGGTTTGCGTGTTCGACTGCTGGGGCTGCCGCGTCGTTATAAAAGGATCTTGCAGGTCCTTGCCGACGTAGCGCTGGTCTGGCTCTCCCTTTGGTTGGCATTCTTGGTGCGGTTGGGCACGGAAGACATGATCAGCCCCTTCGAGGGCCATGCCTGGCTGTTCATCGCCGCCCCGTTGGTGGCCATTCCCCTGTTCATCCGCTTCGGCATGTACCGGGCGGTGATGCGCTACCTGGGCAACGACGCCCTTATCGCGATCGCCAAGGCCGTCACCATTTCCGCGCTGGTCCTGTCGTTGCTGGTCTACTGGTACCGCTCCCCGCCGGCGGTGGTGCCGCGTTCCCTGGTGTTCAACTACTGGTGGTTGAGCATGCTGCTGATCGGCGGCTTGCGTCTGGCCATGCGCCAGTATTTCATGGGCGACTGGTACTCTGCTGTGCAGTCGGTACCATTTCTCAATCGCCAGGATGGCCTGCCCAGGGTGGCCATCTACGGCGCGGGGGCGGCCGGCAACCAGTTGGTTGCGGCATTGCGTCTCGGTCGGGCGATGCGTCCGGTGGCGTTCATCGATGACGACAAGCAGATCGCCAACCGGGTCATTGCCGGTCTGCGGGTCTATACCGCCAAGCATATCCGCCAGATGATCGACGAGACGGGCGCGCAGGAGGTTCTCCTGGCGATTCCTTCCGCCACTCGGGCCCGGCGCCGAGAGATTCTCGAGTCCCTGGAGCCGTTCCCGCTGCACGTGCGCAGCATGCCTGGC
PROTEIN sequence
Length: 257
MIDGLRVRLLGLPRRYKRILQVLADVALVWLSLWLAFLVRLGTEDMISPFEGHAWLFIAAPLVAIPLFIRFGMYRAVMRYLGNDALIAIAKAVTISALVLSLLVYWYRSPPAVVPRSLVFNYWWLSMLLIGGLRLAMRQYFMGDWYSAVQSVPFLNRQDGLPRVAIYGAGAAGNQLVAALRLGRAMRPVAFIDDDKQIANRVIAGLRVYTAKHIRQMIDETGAQEVLLAIPSATRARRREILESLEPFPLHVRSMPG