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NECEvent2014_5_3_scaffold_1199_8

Organism: NECEvent2014_5_3_Pseudomonas_aeruginosa_rel_66_7

near complete RP 49 / 55 MC: 3 BSCG 43 / 51 ASCG 13 / 38 MC: 2
Location: comp(4176..4655)

Top 3 Functional Annotations

Value Algorithm Source
Gamma-aminobutyrate permease n=3 Tax=Pseudomonas aeruginosa RepID=I6REV7_PSEAI similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 159.0
  • Bit_score: 311
  • Evalue 7.00e-82
GABA permease similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 159.0
  • Bit_score: 311
  • Evalue 2.00e-82
GABA permease {ECO:0000313|EMBL:AHB53380.1}; TaxID=1415629 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa MTB- similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 159.0
  • Bit_score: 311
  • Evalue 9.80e-82

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Taxonomy

Pseudomonas aeruginosa → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 480
TCGTCGCGGATGGTCTTCTCCCTGGCCAAGCGCGGCGACGCCCCGAGCGTGCTCAAGCTGACCAACACCGCCCACGTACCACGCCCGGCGGTGCTGGCCAGCACCGCGGTGGGCTTCCTCACCACCATCGTCAACTACTTCGCACCGGAGAAGGTCTTCACCTTCCTCCTCGCCAGCTCCGGCGCCGTGGCGCTACTGGTGTACCTGGTGATCGCCGTGGCCCAGTTGCGCATGCGCAAGCAATTGCAGGCCAGCGGCCAGCCCATCGAGTTCCGCATGTGGCTGTATCCCTGGCTGACCTGGGCGGTGATCCTGTTCATCGTCGCCGCGCTGAGCATCATGCTGATCATGCCGGAGCACCGTCACGAGGTGTTCGCCACCGCTCTGCTGACGATCTTCACCGTCTGCCTCGGGCTGCTCAACGCGCGACGCAAGCCGCGCCTCGGCGAGGACTACGCCGGGAAGACGGCGCGGGTCTGA
PROTEIN sequence
Length: 160
SSRMVFSLAKRGDAPSVLKLTNTAHVPRPAVLASTAVGFLTTIVNYFAPEKVFTFLLASSGAVALLVYLVIAVAQLRMRKQLQASGQPIEFRMWLYPWLTWAVILFIVAALSIMLIMPEHRHEVFATALLTIFTVCLGLLNARRKPRLGEDYAGKTARV*