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NECEvent2014_5_3_scaffold_2381_1

Organism: NECEvent2014_5_3_Pseudomonas_aeruginosa_rel_66_7

near complete RP 49 / 55 MC: 3 BSCG 43 / 51 ASCG 13 / 38 MC: 2
Location: comp(1..87)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LysR family n=3 Tax=Pseudomonas aeruginosa RepID=U6AG15_PSEAI similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 29.0
  • Bit_score: 59
  • Evalue 6.70e-07
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 29.0
  • Bit_score: 59
  • Evalue 2.10e-07
LysR family transcriptional regulator {ECO:0000313|EMBL:AKE66821.1}; Uncharacterized protein {ECO:0000313|EMBL:CEH97953.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomona similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 29.0
  • Bit_score: 59
  • Evalue 9.40e-07

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Taxonomy

Pseudomonas aeruginosa → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 87
ATGGAAACCCTCAGCAACATCCAGTGCTTCGTCCGCAGCGCCGAGGCCGGTAGCTTCGCCGAGGCCGCCAGGCGCCTGGGCCTGACG
PROTEIN sequence
Length: 29
METLSNIQCFVRSAEAGSFAEAARRLGLT