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NECEvent2014_5_3_scaffold_938_6

Organism: NECEvent2014_5_3_Pseudomonas_aeruginosa_rel_66_7

near complete RP 49 / 55 MC: 3 BSCG 43 / 51 ASCG 13 / 38 MC: 2
Location: 4720..5649

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=113 Tax=Pseudomonas RepID=R9Z871_PSEAI similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 309.0
  • Bit_score: 597
  • Evalue 5.60e-168
  • rbh
Malonate utilization transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 309.0
  • Bit_score: 597
  • Evalue 1.60e-168
Transcriptional regulator {ECO:0000313|EMBL:AHW68711.1}; TaxID=1457392 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aer similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 309.0
  • Bit_score: 597
  • Evalue 7.80e-168

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Taxonomy

Pseudomonas aeruginosa → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 930
ATGCTGATCGACGAAGAAATCACCCTCAAGAAGCTGGAAACCTTCCTCGCCTTCATGCGCACCGGCAACCTGGCGCGCGCGGCGGCGGAACTGGGCACCAGCAACGTCAGCGTGCACCGCGCCATCCACTCGCTGGAAAGCGCCCTGCGCTGCCCGCTGTTCAAGCACGAGGGACGCAACCTGACCCCGCTGGAAAGCGCCTACGTGCTCGAGGAGCGCGCGCAGAAGCTGGTCCAGGAGGTACTCGACACGGTGCGCCTGACCCGCGAGGCGGCCGGCTTCTCCGCCGAGCGTTTCAAGCTCGGCGCGCTCTATTCGCTGACGGTGAAGACCGTGCCGCAACTGATCATGGGCCTCAAGCTGCGACGCAGCGCGCTGAACATCGACCTGATCCTCGGCTCCAACGTCGATCTGTTCTACCAGCTGAAGAACATGGAGCTGGACGCCATCCTGGTGTCGCTCAACGACAGCGTCAGCGATCCCGACTGCGAGCACCTGCCGCTGTTCTCCGATGACATCTTCCTCGCCGTGCCGGTGGACTCGCCCTACGCCAGGCTCGCCGAGATCGATCTCAGCACCCTGCGCGACACGCCCTTCGTCACGCTCACCCAGGGCTTCGCCACCCATCAGGACGGCACCCGGGTGTTCCAGCAGGCCGGCTTCGAACCGCAGATCGCCATGCAGGTGAACGACATATTCACCCTCCTCAGCATGGTCAGCTCGGGGGTCGGCCATGCGCTGCTGCCCAAACGCATCGAGGCGGTCTACGAGAACCGCGTGCGGCTGATCCCGCTGCAACCGCGCTATCGCCTGCAGCAGCACATCGGCGTGGTGTTCCTCAAGGCCAAGGAGCGCGACCCGAACCTGCTGGCGTTGCTCGCGGAGTGCCGGATGTACAGCCTGCGCCTGGAGCAGGAGGCGGCGGGATAG
PROTEIN sequence
Length: 310
MLIDEEITLKKLETFLAFMRTGNLARAAAELGTSNVSVHRAIHSLESALRCPLFKHEGRNLTPLESAYVLEERAQKLVQEVLDTVRLTREAAGFSAERFKLGALYSLTVKTVPQLIMGLKLRRSALNIDLILGSNVDLFYQLKNMELDAILVSLNDSVSDPDCEHLPLFSDDIFLAVPVDSPYARLAEIDLSTLRDTPFVTLTQGFATHQDGTRVFQQAGFEPQIAMQVNDIFTLLSMVSSGVGHALLPKRIEAVYENRVRLIPLQPRYRLQQHIGVVFLKAKERDPNLLALLAECRMYSLRLEQEAAG*