ggKbase home page

NECEvent2014_5_3_scaffold_993_3

Organism: NECEvent2014_5_3_Pseudomonas_aeruginosa_rel_66_7

near complete RP 49 / 55 MC: 3 BSCG 43 / 51 ASCG 13 / 38 MC: 2
Location: comp(1129..1380)

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S16 n=108 Tax=Pseudomonas RepID=RS16_PSEA7 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 83.0
  • Bit_score: 168
  • Evalue 3.00e-39
SSU ribosomal protein S16p similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 83.0
  • Bit_score: 168
  • Evalue 8.30e-40
30S ribosomal protein S16 {ECO:0000255|HAMAP-Rule:MF_00385}; TaxID=381754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 83.0
  • Bit_score: 168
  • Evalue 4.10e-39

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pseudomonas aeruginosa → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 252
ATGGTAACCATCCGTCTTGCTCGTGGCGGCTCCAAAAAGCGCCCCTTCTACCACCTGACCGTGACCAACAGCCGCAATGCGCGCGATGGTCGCTTCGTCGAGCGCATCGGTTTCTTCAACCCGGTTGCGACTGGTGGCGAAGTGCGTCTGTCCGTCGACCAGGAGCGTGCTACCTACTGGCTCGGCCAGGGTGCACAGCCGTCTGAGCGCGTTGCTCAGCTGCTCAAGGACGCTGCCAAGGCAAACGCCTAA
PROTEIN sequence
Length: 84
MVTIRLARGGSKKRPFYHLTVTNSRNARDGRFVERIGFFNPVATGGEVRLSVDQERATYWLGQGAQPSERVAQLLKDAAKANA*