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NECEvent2014_5_3_scaffold_1014_4

Organism: NECEvent2014_5_3_Pseudomonas_aeruginosa_rel_66_7

near complete RP 49 / 55 MC: 3 BSCG 43 / 51 ASCG 13 / 38 MC: 2
Location: comp(2690..3745)

Top 3 Functional Annotations

Value Algorithm Source
Predicted capsid packaging protein n=4 Tax=Pseudomonas aeruginosa RepID=A6N5L7_PSEAI similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 351.0
  • Bit_score: 707
  • Evalue 7.40e-201
  • rbh
Predicted capsid packaging protein {ECO:0000313|EMBL:ABR13463.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomona similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 351.0
  • Bit_score: 707
  • Evalue 1.00e-200
Presumed portal vertex protein similarity KEGG
DB: KEGG
  • Identity: 98.0
  • Coverage: 343.0
  • Bit_score: 681
  • Evalue 9.40e-194

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Taxonomy

Pseudomonas aeruginosa → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1056
ATGAGCAAACGTCGCAGCCACCGCCGCCAGCAGCCGGTTACAGTTCAGTCCGCCCAGGAAGGCGAGTTCATCCCGCGCCAGGGCGGCCGTGCCGAGGCCTTCACCTTCGGTGACCCGATGCCGGTGCTCGACGGCCGGGGCATCCTCGACTATCTCGAGTGCTGGTCGAACGGGAGGTGGTACGAGCCGCCGCTGTCCATGGAGGGGCTGGCCAAGGCGGTGGGATCGAGCGTTTACCTGCAGTCGGGCCTGAAGTTCAAGCGCAACATGCTGGCCAAGACCTTCATCCCGCACCGCCTGCTCAGCCGGGCGACGTTCGAGCAGTTCTCCCTGGATTGGCTGACATTCGGCTCGGCCTACCTTGAGCAGCCTCGTTCTCGCCTGGGTACGCGGATGCCGCTGCAGGCGCCGCTGGCCAAGTACATGCGCCGCGGCACCGATCTGGAGACGTTCTACCAGGTGCGCAGCTGGAAGGATGAGCACGAATTCGAGAAGGGGAGCGTGATCCAACTGCGCGAGGCCGACATCAATCAGGAAATCTACGGAGTGCCGGAGTGGTTCTGCGCCCTGCAGAGCGCCCTGCTGAACGAGTCGGCCACGCTGTTCCGGCGTAAGTACTACAACAACGGCAGCCACGCCGGCTTCATCCTCTACATGACCGACGCCGCACAGAACGAGGAAGACATCGATGCGCTGCGCACGGCGCTGAAGACCGCGAAGGGGCCGGGCAACTTCCGCAACCTGTTCGTCTACGCGCCGAACGGGAAGAAGGAGGGGATCCAATTGATTCCGGTCAGCGAGGTTGCGGCCAAGGACGAGTTCGGCTCGATCAAGAACATCAGCCGCGACGACCAGCTCGCCGGTCTGCGGGTCTATCCGCAGCTGATGGGGGTGGTGCCGCAGAACGCTGGTGGGTTCGGATCCATCAGCGACGCGGCAGCGGTCTGGGCCAGCTTGGAACTGGAGCCGATGCAGGCGCGCTTGCAGCAGGTCAATGAACTTTTGGGTGATGAAGTTATTAGTTTTAATAGGTTTGAAGTGGTGAAGAGTAACTAA
PROTEIN sequence
Length: 352
MSKRRSHRRQQPVTVQSAQEGEFIPRQGGRAEAFTFGDPMPVLDGRGILDYLECWSNGRWYEPPLSMEGLAKAVGSSVYLQSGLKFKRNMLAKTFIPHRLLSRATFEQFSLDWLTFGSAYLEQPRSRLGTRMPLQAPLAKYMRRGTDLETFYQVRSWKDEHEFEKGSVIQLREADINQEIYGVPEWFCALQSALLNESATLFRRKYYNNGSHAGFILYMTDAAQNEEDIDALRTALKTAKGPGNFRNLFVYAPNGKKEGIQLIPVSEVAAKDEFGSIKNISRDDQLAGLRVYPQLMGVVPQNAGGFGSISDAAAVWASLELEPMQARLQQVNELLGDEVISFNRFEVVKSN*