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NECEvent2014_5_3_scaffold_1029_1

Organism: NECEvent2014_5_3_Pseudomonas_aeruginosa_rel_66_7

near complete RP 49 / 55 MC: 3 BSCG 43 / 51 ASCG 13 / 38 MC: 2
Location: 1..168

Top 3 Functional Annotations

Value Algorithm Source
Type II secretion system protein F n=1 Tax=Pseudomonas sp. P179 RepID=N2C6D8_9PSED similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 55.0
  • Bit_score: 104
  • Evalue 2.70e-20
general secretion pathway protein F similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 55.0
  • Bit_score: 104
  • Evalue 7.40e-21
General secretion pathway protein F {ECO:0000313|EMBL:BAR69566.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomon similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 55.0
  • Bit_score: 104
  • Evalue 3.70e-20

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Taxonomy

Pseudomonas aeruginosa → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 168
ATGCTCGACCGCGCGGCGCAGACCCTGTCGCGCGACATCGAGCGCCGCGCCATGGGCATGACCGCGTTGCTCGAGCCGCTGATGATCGTGGTCATGGGCGGGGTGGTGCTGACCATCGTGATGGCGGTGCTGATGCCGATCATCGAGATGAACCAGCTGGTCCAGTAG
PROTEIN sequence
Length: 56
MLDRAAQTLSRDIERRAMGMTALLEPLMIVVMGGVVLTIVMAVLMPIIEMNQLVQ*