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NECEvent2014_5_3_scaffold_2759_3

Organism: NECEvent2014_5_3_Pseudomonas_aeruginosa_rel_66_7

near complete RP 49 / 55 MC: 3 BSCG 43 / 51 ASCG 13 / 38 MC: 2
Location: 1355..2206

Top 3 Functional Annotations

Value Algorithm Source
Basic amino acid%2C basic peptide and imipenem outer membrane porin OprD {ECO:0000313|EMBL:CKH97439.1}; EC=3.4.21.- {ECO:0000313|EMBL:CKH97439.1};; OprD {ECO:0000313|EMBL:AHY39261.1}; Outer membrane p similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 284.0
  • Bit_score: 574
  • Evalue 1.10e-160
Basic amino acid, basic peptide and imipenem outer membrane porin OprD n=1 Tax=Pseudomonas aeruginosa DK2 RepID=I6SMU0_PSEAI similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 284.0
  • Bit_score: 574
  • Evalue 7.90e-161
  • rbh
Outer membrane porin, OprD family similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 284.0
  • Bit_score: 574
  • Evalue 2.20e-161

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Taxonomy

Pseudomonas aeruginosa → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 852
ATGAAAGTGATGAAGTGGAGCGCCATTGCACTGGCGGTTTCCGCAGGTAGCACTCAGTTCGCCGTGGCCGACGCATTCGTCAGCGATCAGGCCGAAGCGAAGGGGTTCATCGAAGACAGCAGCCTGAACCTGCTGCTCCGCAACTACTATTTCAACCGTGACGGCAAGGAAGGTCGGGGTGATCGCGTCGATTGGACCCAGGGCTTCCTCACCACCTACGAATCCGGCTTCACTCAAGGCACCGTGGGCTTCGGCGTCGATGCCTTCGGCTACCTGGGCCTGAAGCTCGACGGCACCTCCGACAAGACCGGCACCGGCAACCTGCCGGTGATGAACGACGGCAAGCCGCGCGATGACTACAGCCGCGCCGGCGGCGCCGTGAAGGTGCGCATCTCCAAGACCATGCTGAAGTGGGGCGAGATGCAACCGACCGCCCCGGTCTTCGCCGCTGGCGGCAGCCGCCTGTTCCCGCAGACCGCGACCGGCTTCCAGCTGCAGAGCAGCGAATTCGAAGGGCTCGACCTCGAGGCAGGCCACTTCACCGAGGGCAAGGAGCCGACCACCGTCAAATCGCGCGGTGAACTCTACGCCACCTACGCCGGCCAGACAGCCAAGAGCGCCGACTTCGCTGGCGGCCGCTACGCGATCACCGACAACCTCAGCGCCTCCCTCTATGGCGCAGAGCTGAAAGACATCTATCGCCAGTACTACCTGAACACCAACTACACCATCCCGCTGGCCTCCGATCAATCGCTGGGCTTCGACTTCAACATCTACCGCACCACCGACGAAGGCAAGTCCAAGGCTGGCGACATCAGCAACACCACCTGGTCCCTGGCGGGCGCGTATACC
PROTEIN sequence
Length: 284
MKVMKWSAIALAVSAGSTQFAVADAFVSDQAEAKGFIEDSSLNLLLRNYYFNRDGKEGRGDRVDWTQGFLTTYESGFTQGTVGFGVDAFGYLGLKLDGTSDKTGTGNLPVMNDGKPRDDYSRAGGAVKVRISKTMLKWGEMQPTAPVFAAGGSRLFPQTATGFQLQSSEFEGLDLEAGHFTEGKEPTTVKSRGELYATYAGQTAKSADFAGGRYAITDNLSASLYGAELKDIYRQYYLNTNYTIPLASDQSLGFDFNIYRTTDEGKSKAGDISNTTWSLAGAYT