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NECEvent2014_5_3_scaffold_2807_4

Organism: NECEvent2014_5_3_Pseudomonas_aeruginosa_rel_66_7

near complete RP 49 / 55 MC: 3 BSCG 43 / 51 ASCG 13 / 38 MC: 2
Location: comp(1763..1999)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L28 n=132 Tax=Pseudomonas RepID=RL28_PSEA7 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 78.0
  • Bit_score: 161
  • Evalue 2.60e-37
rpmB; 50S ribosomal protein L28 similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 78.0
  • Bit_score: 161
  • Evalue 7.30e-38
50S ribosomal protein L28 {ECO:0000256|HAMAP-Rule:MF_00373}; TaxID=1350465 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 78.0
  • Bit_score: 161
  • Evalue 3.60e-37

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Taxonomy

Pseudomonas aeruginosa → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 237
ATGTCTAGAGTCTGTCAAGTAACCGGTAAGGGTCCGGTTACCGGGAATAACATTTCCCACGCACACAACAAAACCCGCCGCCGTTTCCTGCCGAACCTGCAGCACCACCGTTTCTGGGTCGAGTCCGAGAAGCGCTTCGTACGTCTGCGCGTTTCCGCCAAGGGCATGCGTATCATCGACAAGCGTGGCATCGAGGCCGTCCTGGCTGACCTGCGTGCCCGCGGCGAAAAATTCTAA
PROTEIN sequence
Length: 79
MSRVCQVTGKGPVTGNNISHAHNKTRRRFLPNLQHHRFWVESEKRFVRLRVSAKGMRIIDKRGIEAVLADLRARGEKF*