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NECEvent2014_5_3_scaffold_2838_2

Organism: NECEvent2014_5_3_Pseudomonas_aeruginosa_rel_66_7

near complete RP 49 / 55 MC: 3 BSCG 43 / 51 ASCG 13 / 38 MC: 2
Location: comp(664..1602)

Top 3 Functional Annotations

Value Algorithm Source
HTH-type transcriptional regulator PtxR n=64 Tax=Pseudomonas RepID=PTXR_PSEAE similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 312.0
  • Bit_score: 619
  • Evalue 2.40e-174
  • rbh
transcriptional regulator PtxR similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 312.0
  • Bit_score: 619
  • Evalue 6.70e-175
  • rbh
HTH-type transcriptional regulator PtxR {ECO:0000313|EMBL:CDH77345.1}; TaxID=1306165 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="P similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 312.0
  • Bit_score: 619
  • Evalue 3.30e-174

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Taxonomy

Pseudomonas aeruginosa → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 939
ATGAGCGCCGCCCTGGAGCGATTGAATCATCTGAACCTGAATCACTTGTATGCCTTCGTCGCCGTCGCCGAACACAACAGCTTCACCGCCGCGGCGGAGGCCCTGGGCTTGTCGAAATCGCTACTCAGCGAGCAGTTGCGACGCCTGGAGGCCGACCTCGGGATCCAGTTGCTGACCCGTACCACCCGTCGCATGACCCTTACCGATCGCGGCGAACTGCTGTTCGGCGTGGCCCAGCGCATGCTCGGCGAGCTGGACGGCGCGCTCTCCGATGTGCGCGACCTGCAGGGCGAGCCCAGTGGCCGGTTGCGCATCACCGCGCCGCAGGACTTCGTTAAATGGCACATCAGCAGCGTTTCCGCGGCGTTCATCCGGCAGTTTCCCAAGGTCCAGGTGGAAATGCTGGCCGATGACCAGTTCAGCGATCTGGTCGGCCAGCGCATCGATCTCGCGGTACGTATCGGCTGGCCGCGCGACTCCGGCCTGCATGCCAGCAAGCTGTGCGACTTCCAGCAGGTTGCCGTGGCGACGCCGGGATACCTCGCCGGCCTGCCGCCGGTGCTCCAGCCGCACGACCTGGCGCGTTGCGAATGGATCGGCCATACCCGCCTGAGCACGCCCTGGACCTGGACCTTCGAACGCCAGCGCGAGCGTGCCACGGTACAGACCCGAGGGCGCCTGCTGGCGAACAACACCCTGGCGGTGTACCGCCTGGTGCTCGACGGTGCCGGCGTCAGCGTGCTGCCAAGCTTCCTGGTAGCCCGCGAGATCGCCCGCGGACGGCTGGTCCGGCTGCTGCCCGGTTGGCGCCTGCCGCAGGGCGGCATCTATGCCCTGTACCCCTCGGCGCGCTACATGCCGGTGCGGGTCAGGGCGTTCATCGAGTCGCTGCGCGAGCATCTCGGTCGCGAGCCGTTCCGCCTGGCGCAGAGCGAATGA
PROTEIN sequence
Length: 313
MSAALERLNHLNLNHLYAFVAVAEHNSFTAAAEALGLSKSLLSEQLRRLEADLGIQLLTRTTRRMTLTDRGELLFGVAQRMLGELDGALSDVRDLQGEPSGRLRITAPQDFVKWHISSVSAAFIRQFPKVQVEMLADDQFSDLVGQRIDLAVRIGWPRDSGLHASKLCDFQQVAVATPGYLAGLPPVLQPHDLARCEWIGHTRLSTPWTWTFERQRERATVQTRGRLLANNTLAVYRLVLDGAGVSVLPSFLVAREIARGRLVRLLPGWRLPQGGIYALYPSARYMPVRVRAFIESLREHLGREPFRLAQSE*