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NECEvent2014_5_3_scaffold_3556_1

Organism: NECEvent2014_5_3_Pseudomonas_aeruginosa_rel_66_7

near complete RP 49 / 55 MC: 3 BSCG 43 / 51 ASCG 13 / 38 MC: 2
Location: comp(1..564)

Top 3 Functional Annotations

Value Algorithm Source
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588, ECO:0000256|RuleBase:RU000618}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588, ECO:0000256|RuleBase:RU000618};; Polydeoxyribonucleotide synthase [NAD(+)] {EC similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 188.0
  • Bit_score: 379
  • Evalue 2.00e-102
ligA; NAD-dependent DNA ligase LigA (EC:6.5.1.2) similarity KEGG
DB: KEGG
  • Identity: 99.5
  • Coverage: 188.0
  • Bit_score: 378
  • Evalue 1.20e-102
DNA ligase n=2 Tax=Pseudomonas aeruginosa RepID=U8RDK8_PSEAI similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 188.0
  • Bit_score: 379
  • Evalue 1.40e-102

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Taxonomy

Pseudomonas aeruginosa → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 564
ATGACCGACACCCAGGCTGCCGCCGAACGCATCGCGCAACTGCGAACCGAACTGGACACTCACAACTACCGTTACTACGTGCTCGACGAACCGAGCATTCCCGACGCCGAATACGATCGCCTGTTCCGCGAGTTGCAGGCGCTGGAGACCGAGTACCCGCAACTGCTGACGCCCGACTCGCCGACCCAGCGGGTCAGCGGCACGCCGGCCTCGGCGTTCGGCGAAGTGCGCCATGAGATCCCCATGCTCAGCCTCGGCAACGCCTTCGAGGAACAGGACCTGCTGGACTTCGACCGCCGCGTACGCGAAGGACTGGCCGACCTGTTGCCTGGCGGCGACCTGCTCGGCGGTGGCGCGGAGGTCGAGTACAGTTGCGAGCCGAAGCTGGACGGCCTGGCCGTCAGCCTGCTCTACGAGCGCGGCCAACTGGTGCGCGGCGCCACCCGCGGCGACGGCAGCACCGGCGAGGACATCACCAGCAACGTACGCACCATTCGCAACGTACCGCTGAAGCTGCACGGCGAAGGCTGGCCGGATATCCTCGAAGTGCGCGGCGAGGTGTTC
PROTEIN sequence
Length: 188
MTDTQAAAERIAQLRTELDTHNYRYYVLDEPSIPDAEYDRLFRELQALETEYPQLLTPDSPTQRVSGTPASAFGEVRHEIPMLSLGNAFEEQDLLDFDRRVREGLADLLPGGDLLGGGAEVEYSCEPKLDGLAVSLLYERGQLVRGATRGDGSTGEDITSNVRTIRNVPLKLHGEGWPDILEVRGEVF