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NECEvent2014_5_3_scaffold_1298_3

Organism: NECEvent2014_5_3_Pseudomonas_aeruginosa_rel_66_7

near complete RP 49 / 55 MC: 3 BSCG 43 / 51 ASCG 13 / 38 MC: 2
Location: comp(1592..2341)

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=1 Tax=Pseudomonas aeruginosa CF18 RepID=U9C406_PSEAI similarity UNIREF
DB: UNIREF100
  • Identity: 62.6
  • Coverage: 278.0
  • Bit_score: 284
  • Evalue 1.10e-73
transcriptional regulator, LysR family similarity KEGG
DB: KEGG
  • Identity: 62.6
  • Coverage: 278.0
  • Bit_score: 283
  • Evalue 5.30e-74
LysR family transcriptional regulator {ECO:0000313|EMBL:AKE68086.1}; Pseudomonas aeruginosa genome assembly PAE221 {ECO:0000313|EMBL:CEI78360.1}; Transcriptional regulator {ECO:0000313|EMBL:CEI04546.1 similarity UNIPROT
DB: UniProtKB
  • Identity: 62.6
  • Coverage: 278.0
  • Bit_score: 283
  • Evalue 2.60e-73

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Taxonomy

Pseudomonas aeruginosa → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 750
ATGATCCGCCTCAGCCAGCGCGCCCTGGCCTACCTCAACGAGGTGATCCACCACGGTTCTCTTCGCCGCGCCGCCCAGCACCTGAACATCGACCCCTCGGCCATCAGCCGGCAGCTCGCCAGCCTGGAGGAACATCTCGGCGTGCGCCTCCTGCAACGCACCCCGCAAGGCGTGGCGCCTACCGAGGCCGGCGAGCTGCTGGTGGCGCACTACCGCCAGCAACGGGCCAACGAAGAGGGCGTGCTGTCGCGTCTGTCGGCCCTGCAGGGGCTGCGCCAGGGCAAGGTGCGCCTGGCGGTCGGCGAGGGCTTCATCGCCGACCTGATCATCCCCGCCAACCATGCCCTCGCCGGACACCGCGGCGCGGTGCCGATGCGCGCGCTGCGCAACGAGTCGCTGGCGTTGATCCACAACAGCACCGGCATGGGCCAACTGGCGGTGATCGCCGCCCAACTGGAGCGCATCGAGCTAAGGCCGAAGCTGCGCACCAACTCGGTGGCGGTGCTGACCAATTTCGTCAAGTCCGGCATCGGCGTGGCCTTCATGCCGGAGTTGACGGTCAGCCACGAGATCGAGGCCGGGCATATCCGTTGCCTGCCGCTGGCCCACCCGGCGCTGCGCGACGCCCGCGCGCGGATCGTCAGCCACAAGGGCCGCGAGCTGACCGTGGCGGCGATCGCCTGCCTGGAACACCTGCGCCGCGGCATGCGCTTCTTCAGTGGCGACGCGCCCGGGCTCTCGCAGCGCTGA
PROTEIN sequence
Length: 250
MIRLSQRALAYLNEVIHHGSLRRAAQHLNIDPSAISRQLASLEEHLGVRLLQRTPQGVAPTEAGELLVAHYRQQRANEEGVLSRLSALQGLRQGKVRLAVGEGFIADLIIPANHALAGHRGAVPMRALRNESLALIHNSTGMGQLAVIAAQLERIELRPKLRTNSVAVLTNFVKSGIGVAFMPELTVSHEIEAGHIRCLPLAHPALRDARARIVSHKGRELTVAAIACLEHLRRGMRFFSGDAPGLSQR*