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NECEvent2014_5_3_scaffold_1307_1

Organism: NECEvent2014_5_3_Pseudomonas_aeruginosa_rel_66_7

near complete RP 49 / 55 MC: 3 BSCG 43 / 51 ASCG 13 / 38 MC: 2
Location: 2..376

Top 3 Functional Annotations

Value Algorithm Source
R64 PilN family type IVB pilus formation outer membrane protein n=1 Tax=Pseudomonas aeruginosa BWHPSA006 RepID=U8VCT1_PSEAI similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 124.0
  • Bit_score: 245
  • Evalue 3.70e-62
Conjugative transfer protein PilN in PFGI-1-like cluster similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 124.0
  • Bit_score: 245
  • Evalue 1.00e-62
Type IVB pilus formation outer membrane protein {ECO:0000313|EMBL:CDH79445.1}; TaxID=1306165 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" s similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 124.0
  • Bit_score: 245
  • Evalue 5.20e-62

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Taxonomy

Pseudomonas aeruginosa → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 375
GTCGGCAGTACCACCTCGCTGATCCCGGGCGCCGTGACCAGCGGCTACAACATGAGCCTGCTGCCGTTCGTGATGGAAAGCGGCGAGATGCTGCTGAAGATCAACATCAACATGACCTCCAGACCGACGTTCGAAATGCAGACCAGCGGGGACTCCAAAGCCCAGTTCCCGAGCTACGACATACAACTGTTCGACCAGAAGGTACGCCTGCGCAGCGGCGAGACCTTGGTGCTCTCCGGCTTCGACCAGACCACCGAGGATACCAACAAGGTCGGCACCGGCGACGCCGGATTCTTCGGCCTTGGCGGCGGGCTGACCCGCAATACCAAACGCGAGGTCATCGTGGTGCTGATCACCCCCGTCGTGCTGGGCTGA
PROTEIN sequence
Length: 125
VGSTTSLIPGAVTSGYNMSLLPFVMESGEMLLKININMTSRPTFEMQTSGDSKAQFPSYDIQLFDQKVRLRSGETLVLSGFDQTTEDTNKVGTGDAGFFGLGGGLTRNTKREVIVVLITPVVLG*