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NECEvent2014_5_3_scaffold_1307_5

Organism: NECEvent2014_5_3_Pseudomonas_aeruginosa_rel_66_7

near complete RP 49 / 55 MC: 3 BSCG 43 / 51 ASCG 13 / 38 MC: 2
Location: 3817..4353

Top 3 Functional Annotations

Value Algorithm Source
Type II secretion system protein F n=1 Tax=Pseudomonas aeruginosa DHS01 RepID=V4XGY3_PSEAI similarity UNIREF
DB: UNIREF100
  • Identity: 99.4
  • Coverage: 179.0
  • Bit_score: 351
  • Evalue 5.20e-94
  • rbh
type IV B pilus protein similarity KEGG
DB: KEGG
  • Identity: 99.4
  • Coverage: 179.0
  • Bit_score: 351
  • Evalue 1.50e-94
Type IV B pilus protein {ECO:0000313|EMBL:CDH79449.1}; TaxID=1306165 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aerug similarity UNIPROT
DB: UniProtKB
  • Identity: 98.9
  • Coverage: 179.0
  • Bit_score: 351
  • Evalue 9.60e-94

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Taxonomy

Pseudomonas aeruginosa → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 537
ATGGGGGGCTTCTGGGAGCAGTTGCAGTTCGCCTTCTACAGCAAGCAGTTCGGCCGCAAGGAACGCCTGCAGTTCTACGAAAGCATGTCCACCCTGCTCGAAAACGGGGTCCCGCTGAAGGACGCTGTGGCAGAGGTACACAAGATCTTCGCTCATGAGGGACAGCATCCGTTTCATCCGGTGGCCATCGCCAGTCGCGAAGCGCTGATGGGGCTGTCCAACGGCAAGCGTCTGGCCACCGCCATGGCGCTCTATCTACCCGCCCAGGAGCGAGCGCTGATCGAGGCCGGCGAGATGAGCGGCAACCTGGTTCAGGCCATGGGCGATGCCATCTCCCTGGTCGAGGCCCAGGCCAGGATCCGCGCCACCATCTGGCAGGCGCTGCTCTATCCCTCGGCGCTGTCCGCCATGATGGTGTTCCTGCTGTGCATCGTGGCCTATCGCATGGTCCCCAGCCTGGCCAGGCTCTCCGACCCAGTCACGTGGACCGGCCCGCCCGCCACGCTCAACGCCATTGCCAGCTTCGTCACAGGACCT
PROTEIN sequence
Length: 179
MGGFWEQLQFAFYSKQFGRKERLQFYESMSTLLENGVPLKDAVAEVHKIFAHEGQHPFHPVAIASREALMGLSNGKRLATAMALYLPAQERALIEAGEMSGNLVQAMGDAISLVEAQARIRATIWQALLYPSALSAMMVFLLCIVAYRMVPSLARLSDPVTWTGPPATLNAIASFVTGP