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NECEvent2014_5_3_scaffold_1441_2

Organism: NECEvent2014_5_3_Pseudomonas_aeruginosa_rel_66_7

near complete RP 49 / 55 MC: 3 BSCG 43 / 51 ASCG 13 / 38 MC: 2
Location: comp(151..1005)

Top 3 Functional Annotations

Value Algorithm Source
bacterial regulatory helix-turn-helix , lysR family protein KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 284.0
  • Bit_score: 561
  • Evalue 1.50e-157
  • rbh
Probable transcriptional regulator {ECO:0000313|EMBL:AAG07590.1}; TaxID=208964 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudom UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 284.0
  • Bit_score: 561
  • Evalue 7.50e-157

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Taxonomy

Pseudomonas aeruginosa → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 855
ATGGACCTTTCCTCCCTCGAAATCTTCCGCGCGGTCGCCCACGAGGCCAGCGTCACCCGCGCCGCTCAGCGGTTGCAGCGAGCGCAGTCGAACGTCACCACGCGGATCCGCCAGCTCGAGGAGGACCTGGGCGTCGAACTGTTCCTGCGCGACGGCAAGCGCATGAGCCTGACCGAACGCGGCAGCGAATTCCTCGCCTACGCCGAGCAGTTGCTGGCTCTCGCCGACGAGGCGCGTCAGTCGATGCATCCCGCCGAGCCCGGCGGGCGCCTGCGCCTGGGCAGTATGGAAAGCACCGCGGCCAGCCGCCTGCCGGCGCTGCTGGCGAGCTATCACAAGGCCTGTCCGCGGGTCGCCCTGGAAGTCTCCACCGGCACCAGTCACGCGTTGTTCGATGGGGTGCGGGCGCGGCGCCTGGACTGCGCGCTGGTGGCCGCCGGCCCGGGCTGGGCCGGCGAACTCGATGGCAGCGGCCTGCGCGGCGAGCCGCTGTTCCGCGAGGAACTGCTGATGATCCTGCCGGCCGAACACCCGCCGGTCCACGACGTCGCCGAGGTGCGCCTGCGCACCCTGGCCGGCTTCGCCCGTGGCTGCACCTACCGGCAACTGGCCGAGGACAGCCTGGGCACGCCGCTGACGGTGCAGGAAGTCGGCTCCTACCATGCGATCCTCGCCTGCGTCGCCGCCGGCGCCTGTGTCGGCGTGCTGCCGCGCTCGGTGCTGCAACTGCTCGGCACGCCGCCGCTGCGCAGCCTGCCCCTTGCCGAAGTAGACACCTGGCTGGTCTGGCGCGAAGGCTACGCGACCGCCGCCTTCGAACGCTGGCGCGGCGTGCTGGGCCAGGCCGGCGACTGA
PROTEIN sequence
Length: 285
MDLSSLEIFRAVAHEASVTRAAQRLQRAQSNVTTRIRQLEEDLGVELFLRDGKRMSLTERGSEFLAYAEQLLALADEARQSMHPAEPGGRLRLGSMESTAASRLPALLASYHKACPRVALEVSTGTSHALFDGVRARRLDCALVAAGPGWAGELDGSGLRGEPLFREELLMILPAEHPPVHDVAEVRLRTLAGFARGCTYRQLAEDSLGTPLTVQEVGSYHAILACVAAGACVGVLPRSVLQLLGTPPLRSLPLAEVDTWLVWREGYATAAFERWRGVLGQAGD*