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NECEvent2014_5_3_scaffold_3692_1

Organism: NECEvent2014_5_3_Pseudomonas_aeruginosa_rel_66_7

near complete RP 49 / 55 MC: 3 BSCG 43 / 51 ASCG 13 / 38 MC: 2
Location: 3..338

Top 3 Functional Annotations

Value Algorithm Source
DNA-binding transcriptional regulator GlcC n=1 Tax=Pseudomonas aeruginosa PA45 RepID=N4WBC2_PSEAI similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 111.0
  • Bit_score: 226
  • Evalue 1.20e-56
GntR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 111.0
  • Bit_score: 226
  • Evalue 3.40e-57
DNA-binding transcriptional regulator GlcC {ECO:0000313|EMBL:EZO96311.1}; TaxID=1418240 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 111.0
  • Bit_score: 226
  • Evalue 1.70e-56

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Taxonomy

Pseudomonas aeruginosa → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 336
CCCCGCGAGCACGCCCGCCGCGACCACGCGTTCCACCGGGCGATCAGCGAGGCATCGCACAATCCGGTGCTGGTGCATACCCTGCAATCGCTCAACGAACTGCTGCTGAGCACGGTGTTCGCCTCAGTGAACAACCTCTATCACCGGCCGCCGCAGAAACGCCAGATCGACCGCCAGCACGCGCGCCTCTACGCGGCCCTCCGCGAGCGCCAGCCGGACCAGGCGCAACGGGCGGCGCGCGAACATATCCACAGCATCCGCGACAACCTGCGGGAGATCGAGCAGGAAGAACAGCGCCTGGTCCGCGCCACCCTGCGCCTGAACGGCTGGGGGTGA
PROTEIN sequence
Length: 112
PREHARRDHAFHRAISEASHNPVLVHTLQSLNELLLSTVFASVNNLYHRPPQKRQIDRQHARLYAALRERQPDQAQRAAREHIHSIRDNLREIEQEEQRLVRATLRLNGWG*