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NECEvent2014_5_3_scaffold_3080_2

Organism: NECEvent2014_5_3_Pseudomonas_aeruginosa_rel_66_7

near complete RP 49 / 55 MC: 3 BSCG 43 / 51 ASCG 13 / 38 MC: 2
Location: 1415..1990

Top 3 Functional Annotations

Value Algorithm Source
Type VI secretion protein n=1 Tax=Pseudomonas aeruginosa VRFPA01 RepID=V4QU54_PSEAI similarity UNIREF
DB: UNIREF100
  • Identity: 99.1
  • Coverage: 108.0
  • Bit_score: 219
  • Evalue 2.60e-54
Type VI secretion protein {ECO:0000313|EMBL:KFF35084.1}; TaxID=1262663 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aer similarity UNIPROT
DB: UniProtKB
  • Identity: 99.1
  • Coverage: 108.0
  • Bit_score: 219
  • Evalue 3.60e-54
Uncharacterized protein ImpA similarity KEGG
DB: KEGG
  • Identity: 98.1
  • Coverage: 108.0
  • Bit_score: 216
  • Evalue 6.10e-54

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Taxonomy

Pseudomonas aeruginosa → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 576
ATGACCCTGCCTCTTTCCGGCAACGCCCTGCCCCTGGAAGTGCTGCTCGAACCGATCGACCCCGGACAGCCGTGTGGCCCCAGCCTGCGCTACGACCCGGACTACGACCGCCTGCGCGAGTTGCGCCGGGAGGACGACAGCAGCCTGCCGACCGGCGTCTGGCAGGCGGAAGCCAAGCGCGCCGACTGGGCCGCGGTGGAGCAGTTGGCCAGCGAACTGTTGCAGCGGCGCAGCAAGGACCTGATGCTCGCCGCCTGGCTCGGCGAGGCCTGGCTGCAACGCGGCGGGCTGGGCGGATTGCAGCGCGCGCTGGTGCTGCTGGTGCTGAGCTTCGTGCCCGGGGTCAACCTGATCGCCACGCCGCTGTGGATCCTCTTCGGCATCTGGATGATGGCGGTGCAGTACATCGACTATCCGGCGGACAACCACAAGCTCGGCTGGAACGAGATGCTCGCCTGGCTGCGCAGCAAGCGCTGGGCGTGCATGGGTTTCGGCGGGGTGACCTACCTGGCGCTGCTGATCCCGCTGGTCAACCTGGTCATGATGCCCGCCGCCGTCGCCGGTGCCACCCTGTTC
PROTEIN sequence
Length: 192
MTLPLSGNALPLEVLLEPIDPGQPCGPSLRYDPDYDRLRELRREDDSSLPTGVWQAEAKRADWAAVEQLASELLQRRSKDLMLAAWLGEAWLQRGGLGGLQRALVLLVLSFVPGVNLIATPLWILFGIWMMAVQYIDYPADNHKLGWNEMLAWLRSKRWACMGFGGVTYLALLIPLVNLVMMPAAVAGATLF