ggKbase home page

NECEvent2014_5_3_scaffold_3129_1

Organism: NECEvent2014_5_3_Pseudomonas_aeruginosa_rel_66_7

near complete RP 49 / 55 MC: 3 BSCG 43 / 51 ASCG 13 / 38 MC: 2
Location: comp(84..1247)

Top 3 Functional Annotations

Value Algorithm Source
Ornithine decarboxylase {ECO:0000313|EMBL:BAQ42164.1}; EC=4.1.1.17 {ECO:0000313|EMBL:BAQ42164.1};; Pseudomonas aeruginosa genome assembly PAE221 {ECO:0000313|EMBL:CEI77378.1}; TaxID=287 species="Bacte similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 387.0
  • Bit_score: 774
  • Evalue 7.60e-221
Ornithine decarboxylase n=132 Tax=Pseudomonas RepID=B7V059_PSEA8 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 387.0
  • Bit_score: 774
  • Evalue 5.40e-221
  • rbh
ornithine decarboxylase similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 387.0
  • Bit_score: 774
  • Evalue 1.50e-221

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pseudomonas aeruginosa → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1164
ATGTCCATCAAGGTCGAGGATTATTTCGCCCCTGAAACCTTCCAGCGCATGAAGGCCTTCGCCGACAAGCAGGAAACCCCCTTTGTAGTCATCGACAAGCAGACCATCGCCGATGCCTACGACCAACTGACCGACTGCTTCCCCTTCGCCAGGATCTACTACGCGGTGAAGGCCAATCCCGCTACCGAAATCACCGAGCTGCTGCGCGACAAGGGTTCGAACTTCGATATCGCCTCGATCTACGAACTGGACAAGGTGATGAAGACCGGCGTCGGTCCGGAGCGCATCAGCTACGGCAACACCATCAAGAAATCCAAGGACATCCGCTACTTCTACGAGAAGGGCGTGCGCCTGTTCGCCACCGACTCCGAAGCCGACCTGCGCAACATCGCCAAGGCCGCTCCCGGCGCCAAGGTCTACGTGCGTATCCTCACCGAGGGCTCGACTACCGCAGACTGGCCGTTGTCGCGCAAGTTCGGCTGCCAGACCGACATGGCCATGGACCTGCTGATCCTGGCCCGCCAGCTGGGCCTGGAGCCCTACGGCATTTCCTTCCACGTCGGTTCGCAGCAGCGCGACATCTCGGTGTGGGACGCGGCGATCGCCAAGGTCAAGGTGATCTTCGAGCGCCTGAAGGAAGAAGACGGCATCGTCCTGAAGATGATCAACATGGGCGGCGGCTTCCCGGCCAACTACATCACCAAGACCAACGACCTGGAAACCTATGCGGAGGAGATCATCCGCTTCCTCAAGGAGGACTTCGGCGACGACCTGCCGGAAATCATCCTCGAGCCGGGCCGTTCGCTGATCGCCAATGCCGGCATCCTGGTCAGCGAAGTGGTGCTGGTCGCCCGCAAGTCGCGGACCGCCGTGGAGCGCTGGGTCTATGCCGACGTCGGCAAGTTCTCCGGACTGATCGAAACCATGGACGAGTCGATCAAGTTCCCGATCTGGACCGAGAAGCAGGGCGAGATGGAAGAGGTGGTGATCGCCGGCCCGACCTGCGACAGCGCCGACATCATGTACGAGCACTACAAGTATGGCCTGCCGCTGAACCTGGCGAGCGGCGACCGCCTTTACTGGCTGTCTACCGGCGCCTACACCACCAGCTACAGTGCGGTGGAGTTCAACGGCTTCCCGCCGCTGAAGGCGTTCTACCTCTAG
PROTEIN sequence
Length: 388
MSIKVEDYFAPETFQRMKAFADKQETPFVVIDKQTIADAYDQLTDCFPFARIYYAVKANPATEITELLRDKGSNFDIASIYELDKVMKTGVGPERISYGNTIKKSKDIRYFYEKGVRLFATDSEADLRNIAKAAPGAKVYVRILTEGSTTADWPLSRKFGCQTDMAMDLLILARQLGLEPYGISFHVGSQQRDISVWDAAIAKVKVIFERLKEEDGIVLKMINMGGGFPANYITKTNDLETYAEEIIRFLKEDFGDDLPEIILEPGRSLIANAGILVSEVVLVARKSRTAVERWVYADVGKFSGLIETMDESIKFPIWTEKQGEMEEVVIAGPTCDSADIMYEHYKYGLPLNLASGDRLYWLSTGAYTTSYSAVEFNGFPPLKAFYL*