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NECEvent2014_5_3_scaffold_3144_2

Organism: NECEvent2014_5_3_Pseudomonas_aeruginosa_rel_66_7

near complete RP 49 / 55 MC: 3 BSCG 43 / 51 ASCG 13 / 38 MC: 2
Location: 1329..1952

Top 3 Functional Annotations

Value Algorithm Source
Homospermidine synthase (EC:2.5.1.44) similarity KEGG
DB: KEGG
  • Identity: 99.5
  • Coverage: 208.0
  • Bit_score: 415
  • Evalue 7.40e-114
Homospermidine synthase n=40 Tax=Pseudomonas RepID=I6SXH1_PSEAI similarity UNIREF
DB: UNIREF100
  • Identity: 99.5
  • Coverage: 208.0
  • Bit_score: 415
  • Evalue 2.60e-113
  • rbh
Homospermidine synthase {ECO:0000313|EMBL:ETU82769.1}; TaxID=1402581 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aerug similarity UNIPROT
DB: UniProtKB
  • Identity: 99.5
  • Coverage: 208.0
  • Bit_score: 415
  • Evalue 3.70e-113

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Taxonomy

Pseudomonas aeruginosa → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 624
ATGGATTTTTCAATTAATCCCCCCCAGCGAATTGTCTTTGTGGGACTAGGAACGATTGCCCAGTCCTTCCTTCCTCTCCTTTCTAAGGTTCACGACTTATCTACTTTAGAAATCTACGCGATCGATCCAAAAACACCACCGCTTATTGAGCACTTTGCTAACAGTTTTGGCTTAAAATTTATCAACTCTGCAATTGATCAAATCAACTATCGCGACATTCTTGTGCCGATTCTTGGTGAAGGGACGGTTCTAATAAATCTATCAACCGATGTCTCAAGTCTTGCCCTGATAGAATTATGCCGCTCCGCAGGGGCTCTTTATTTAGACACATGCATTGAGCCGTGGAAGGGCGGATATGATGACCCAACCATACCACTGCATAAGCGAACTAACTATCACTTAAGAGAACAAATGCTGTCTCTGAAAAAGAGGCTAGGCTCAGGGGTGACGGCTCTCGTGGCGCATGGCGCGAATCCTGGGTTGGTATCCCACTTCGTTAAACGTGCTCTTTTAGATTTAGCGGAAGAGATATTGGGTGATTGTAAAAAGCCCTCTAATAAAGAGCAGTGGGCTATCCTAAGCCAAAGATTGGGTGTCAAAGTAATCCATGTCGCAGAGTACGAC
PROTEIN sequence
Length: 208
MDFSINPPQRIVFVGLGTIAQSFLPLLSKVHDLSTLEIYAIDPKTPPLIEHFANSFGLKFINSAIDQINYRDILVPILGEGTVLINLSTDVSSLALIELCRSAGALYLDTCIEPWKGGYDDPTIPLHKRTNYHLREQMLSLKKRLGSGVTALVAHGANPGLVSHFVKRALLDLAEEILGDCKKPSNKEQWAILSQRLGVKVIHVAEYD