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NECEvent2014_5_3_scaffold_4083_2

Organism: NECEvent2014_5_3_Pseudomonas_aeruginosa_rel_66_7

near complete RP 49 / 55 MC: 3 BSCG 43 / 51 ASCG 13 / 38 MC: 2
Location: comp(806..1447)

Top 3 Functional Annotations

Value Algorithm Source
Bacterial regulatory helix-turn-helix , lysR family protein n=39 Tax=Pseudomonas RepID=T2EKM5_PSEAI similarity UNIREF
DB: UNIREF100
  • Identity: 99.5
  • Coverage: 213.0
  • Bit_score: 416
  • Evalue 1.60e-113
  • rbh
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 99.5
  • Coverage: 213.0
  • Bit_score: 416
  • Evalue 4.50e-114
Transcriptional regulator {ECO:0000313|EMBL:ERV69621.1}; TaxID=1402545 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aer similarity UNIPROT
DB: UniProtKB
  • Identity: 99.5
  • Coverage: 213.0
  • Bit_score: 416
  • Evalue 2.20e-113

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Taxonomy

Pseudomonas aeruginosa → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 642
GACCGCCAGTTGCACATCGGTTTCAGCCGCTACCTCGATCCCGGCTGGTCCGGCGAGCTGGCCCGGCAACTGAAGGAAGCGCGGGTGTGCAGCGCCGTTTCGCCATCCTGGGCGCCATCGCTGGACCTGCTCAGCCTGGTCCGCGAGTCGTCCCTGGACGCGGCGATCATCGGCGCGCCACCGAAGGTGGTGCGTGAATACGAGCTGATGGAGATCGGCAGCTACGAGCACGTCATCGCCCTGTCGGAAACCCTGCACCGGCGACTGGCGCCCGACCGGTCGCTGAACGACCTGATCGGCGAGCCGCTGCTGGTACCGAAGGACTCGCTGTTTCCCGCCTACAGCCAGTTCATGAACGATGCGATGGATGCCGCTGCCTTCGCGCCCCGGCGCAGCGTGCGGCCGAACGACCTGAGCATTCTCCTGGCCCAGGTCGCCAGCGGCGACGGCTTCGCCTTCCTGCCGTTGTCGCTGACCAAGTTCGCCTATCCGGGGGTGGCCTTCACCGCTCTGCCGGCGGCGGTCAACGAAGGCTTCCGCCTGCCGGTGGGGCTGGCGGTGTCGCCGACTTCGCGGCTTCGCGCCAGCGACACCCAGTTCGAATGCTTCGTCGAGACCGCGCGGCGGGTCGCCGCCGGTTGA
PROTEIN sequence
Length: 214
DRQLHIGFSRYLDPGWSGELARQLKEARVCSAVSPSWAPSLDLLSLVRESSLDAAIIGAPPKVVREYELMEIGSYEHVIALSETLHRRLAPDRSLNDLIGEPLLVPKDSLFPAYSQFMNDAMDAAAFAPRRSVRPNDLSILLAQVASGDGFAFLPLSLTKFAYPGVAFTALPAAVNEGFRLPVGLAVSPTSRLRASDTQFECFVETARRVAAG*