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NECEvent2014_5_3_scaffold_4175_2

Organism: NECEvent2014_5_3_Pseudomonas_aeruginosa_rel_66_7

near complete RP 49 / 55 MC: 3 BSCG 43 / 51 ASCG 13 / 38 MC: 2
Location: comp(861..1406)

Top 3 Functional Annotations

Value Algorithm Source
Probable DNA repair protein PABE171_5023 n=5 Tax=Pseudomonas aeruginosa RepID=K1BGG0_PSEAI similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 181.0
  • Bit_score: 346
  • Evalue 1.70e-92
  • rbh
Non-homologous end joining protein Ku {ECO:0000256|HAMAP-Rule:MF_01875}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pse similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 181.0
  • Bit_score: 346
  • Evalue 2.40e-92
DNA repair protein similarity KEGG
DB: KEGG
  • Identity: 99.4
  • Coverage: 181.0
  • Bit_score: 343
  • Evalue 4.10e-92

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Taxonomy

Pseudomonas aeruginosa → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 546
CTGGCCCCCGACCGGCGCGGAGGCAAGGTCTACGCGCTGCTCCGGGAGACCCTGGAGCGTACCGGCAAGGTCGCCCTGGCCAACGTCGTCCTGCACACCCGCCAGCACCTAGCGCTCCTGCGGCCTCTGCAGGACGCCCTGGTGCTGATCACCCTGCGCTGGCCGTCGCAGGTGCGCAGCCTGGATGGCCTGGAGCTGGACGAAAGCGTCACCGAGGCGAAACTCGACAAGCGCGAGCTGGAGATGGCCAAGCGCCTGGTGGAGGACATGGCCTCCCACTGGGAGCCGGACGAATACAAGGACAGCTTCAGCGACAAGATCATGAAGCTGGTCGAGGAAAAGGCCGCCAAGGGCCAGCTGCACGCGGTGGAGGAAGAGGAGGAGGTGGCTGGCAAGGGCGCCGACATCATCGATCTCACCGACCTGCTCAAGCGCAGCCTGCGTTCCCGCGCCGGCGGCGGCAAGGACAAGGGCAGCGAAAAGGCCGGGGCCGACCCGAAGGGTCGCGCCAAGTCCGGTGCCTCGCGTTCGCGGCGCAAGGCCTGA
PROTEIN sequence
Length: 182
LAPDRRGGKVYALLRETLERTGKVALANVVLHTRQHLALLRPLQDALVLITLRWPSQVRSLDGLELDESVTEAKLDKRELEMAKRLVEDMASHWEPDEYKDSFSDKIMKLVEEKAAKGQLHAVEEEEEVAGKGADIIDLTDLLKRSLRSRAGGGKDKGSEKAGADPKGRAKSGASRSRRKA*