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NECEvent2014_5_3_scaffold_4690_1

Organism: NECEvent2014_5_3_Pseudomonas_aeruginosa_rel_66_7

near complete RP 49 / 55 MC: 3 BSCG 43 / 51 ASCG 13 / 38 MC: 2
Location: 2..256

Top 3 Functional Annotations

Value Algorithm Source
Conjugal transfer ATPase TrbE n=1 Tax=Pseudomonas aeruginosa BWHPSA011 RepID=U8WC12_PSEAI similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 84.0
  • Bit_score: 178
  • Evalue 3.80e-42
type IV transport system protein VirB similarity KEGG
DB: KEGG
  • Identity: 91.7
  • Coverage: 84.0
  • Bit_score: 162
  • Evalue 4.60e-38
CagE, TrbE, VirB component of type IV transporter system, conserved region protein {ECO:0000313|EMBL:ADV00563.1}; Flags: Precursor;; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; similarity UNIPROT
DB: UniProtKB
  • Identity: 91.7
  • Coverage: 84.0
  • Bit_score: 162
  • Evalue 2.30e-37

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Taxonomy

Alicycliphilus denitrificans → Alicycliphilus → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 255
TACCAATCCCGCCTCGGCAACCGCCTGTTCGACCTCGACCTCGGGCCGGCGACGCTGGCCTTCGCGGGCGCTTCCACGCCGCAGGACCAGCGCGACATGGATCGCGTGCTGCTGGACGCCGGCGTGCCCGGCTTCGCGAGCGCCTGGCTGCGCCATCGCGGCCTCGATTGGGCGGCAGACCTGCTGCCCTCGTTCCCCGGCCTCGTGCCGGCTTCACCTCGTTTCGCCGACCACCCACAGGAGAACCTGCCATGA
PROTEIN sequence
Length: 85
YQSRLGNRLFDLDLGPATLAFAGASTPQDQRDMDRVLLDAGVPGFASAWLRHRGLDWAADLLPSFPGLVPASPRFADHPQENLP*