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NECEvent2014_5_3_scaffold_4780_3

Organism: NECEvent2014_5_3_Pseudomonas_aeruginosa_rel_66_7

near complete RP 49 / 55 MC: 3 BSCG 43 / 51 ASCG 13 / 38 MC: 2
Location: comp(848..1180)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator n=6 Tax=Pseudomonas aeruginosa RepID=J6MFR6_PSEAI similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 110.0
  • Bit_score: 217
  • Evalue 7.30e-54
LuxR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 110.0
  • Bit_score: 217
  • Evalue 2.10e-54
Capsular synthesis regulator component B {ECO:0000313|EMBL:BAR67075.1}; LuxR family transcriptional regulator {ECO:0000313|EMBL:AKE69039.1}; Pseudomonas aeruginosa genome assembly PAE221 {ECO:0000313| similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 110.0
  • Bit_score: 217
  • Evalue 1.00e-53

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Taxonomy

Pseudomonas aeruginosa → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 333
GTCCTGCGCAGCGGCGCCTCGGCCTACATCAGCAAGCGCAGCCCGCTGGAGACGTTGAAGGCGGCGCTGGAGTGCATGGCGCTCGGACAGACCTTCCTCGACCCCGGCCTGCACCCGCAGCGGCATACCGGCAAGCCGCTGAGCCCCACCGAGGTGGACATCCTCCGGCGCCTGGCGCGTGGCGACACGGTCAGCGAGATCGCCCAGCGGACCATGCGCAGCGTGTCGACCATCAGCACCCACAAGAAGAACGCGATGGTCAAGATAGGCCTCAACAGTGACGCCGAACTGATCGCCCTGGGCGTGATGAACTGGCTCCACGAACTCGCCTGA
PROTEIN sequence
Length: 111
VLRSGASAYISKRSPLETLKAALECMALGQTFLDPGLHPQRHTGKPLSPTEVDILRRLARGDTVSEIAQRTMRSVSTISTHKKNAMVKIGLNSDAELIALGVMNWLHELA*