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NECEvent2014_5_3_scaffold_656_4

Organism: NECEvent2014_5_3_Propionibacterium_HGH0353-rel_63_9

near complete RP 51 / 55 MC: 7 BSCG 48 / 51 ASCG 13 / 38 MC: 1
Location: 2374..3480

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor SigA n=1 Tax=Propionibacterium sp. HGH0353 RepID=S3WSX9_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 99.5
  • Coverage: 368.0
  • Bit_score: 720
  • Evalue 1.20e-204
  • rbh
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=1203571 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibac similarity UNIPROT
DB: UniProtKB
  • Identity: 99.7
  • Coverage: 368.0
  • Bit_score: 721
  • Evalue 7.30e-205
RNA polymerase sigma factor RpoD similarity KEGG
DB: KEGG
  • Identity: 99.2
  • Coverage: 368.0
  • Bit_score: 718
  • Evalue 1.20e-204

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Taxonomy

Propionibacterium sp. HGH0353 → Propionibacterium → Propionibacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1107
GTGGAGCGCGATGGCGACGACGTTGTACTGACCATTGGCGGCAAGAAGCGTTCCCTCGATGACGTCGACGACCGGGACTACAACCCGGACGAGGCCGCCAAGGACGAGCAGCAGATCAACAAGGAGGCCGAGGGGTTCTCCCTGTCCGACAATGATGATGCCGACGAACCCGAGCAGACCGTCATGGTCGCGGGTGCCACCGCCGACCCCGTCAAGGATTACCTCAAGCAGATCGGCAAAGTGGCCCTGCTGAACGCTGTCGAGGAGGTTGACCTCGCCAAGCGTATTGAGGCTGGCCTGTTCGCCGGCGAGCAGCTGGCCGCCTCGGACACCAAGATCCCCGAGAAGGATCGCGAGGACTACGAGTGGATCGCCGAGGACGGCAAGGCCGCCAAGAACCACCTGCTGGAAGCCAACCTCCGACTGGTGGTGTCACTGGCCAAGCGCTACACCGGCCGCGGCATGCTCTTCCTCGACCTCATTCAGGAAGGAAACCTCGGCCTCATCCGCGCCGTCGAGAAGTTCGACTACACCAAGGGCTACAAATTCTCGACCTACGCGACGTGGTGGATCAAGCAGGCCATCACCCGAGCCATGGCTGACCAGGCCCGCACCATCCGTATTCCGGTGCACATGGTCGAGGTCATCAACAAGCTGGCCCGAGTGCAGCGTCAGATGCTCCAGGACCTGGGACGCGAACCCACCCCGGAGGAGCTGGCCAAGGAACTTGACATGACCGCTGAGAAGGTCGTCGAGGTGCAGAAGTACGGCCGTGAGCCGATTTCCCTGCACACCCCACTGGGTGAGGACGGCGACTCCGAGTTCGGCGATCTCATCGAGGATTCCGAGGCCATCGTGCCGGCCGACGCCGTCAACTTCACCCTCCTGCAGGAGCAGCTCCACGACGTCCTCGACACCCTGTCCGAGCGCGAGGCCGGCGTCGTCTCGATGCGATTCGGCCTGACCGACGGCCAGCCGAAGACCCTCGACGAGATCGGCAAGGTGTACGGCGTCACCCGTGAGCGCATTCGCCAGATCGAGTCCAAGACGATGTCGAAACTGCGCCACCCGAGCCGCTCCCAGGTGCTGCGCGATTACCTCGAATGA
PROTEIN sequence
Length: 369
VERDGDDVVLTIGGKKRSLDDVDDRDYNPDEAAKDEQQINKEAEGFSLSDNDDADEPEQTVMVAGATADPVKDYLKQIGKVALLNAVEEVDLAKRIEAGLFAGEQLAASDTKIPEKDREDYEWIAEDGKAAKNHLLEANLRLVVSLAKRYTGRGMLFLDLIQEGNLGLIRAVEKFDYTKGYKFSTYATWWIKQAITRAMADQARTIRIPVHMVEVINKLARVQRQMLQDLGREPTPEELAKELDMTAEKVVEVQKYGREPISLHTPLGEDGDSEFGDLIEDSEAIVPADAVNFTLLQEQLHDVLDTLSEREAGVVSMRFGLTDGQPKTLDEIGKVYGVTRERIRQIESKTMSKLRHPSRSQVLRDYLE*