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NECEvent2014_5_3_scaffold_1229_1

Organism: NECEvent2014_5_3_Propionibacterium_HGH0353-rel_63_9

near complete RP 51 / 55 MC: 7 BSCG 48 / 51 ASCG 13 / 38 MC: 1
Location: 1..1371

Top 3 Functional Annotations

Value Algorithm Source
Zn-dependent hydrolase, RNA-metabolizing, CPSF (EC:3.1.-.-) similarity KEGG
DB: KEGG
  • Identity: 73.0
  • Coverage: 456.0
  • Bit_score: 683
  • Evalue 5.50e-194
Ribonuclease J n=1 Tax=Propionibacterium sp. HGH0353 RepID=S3X8C3_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 99.8
  • Coverage: 456.0
  • Bit_score: 888
  • Evalue 4.00e-255
  • rbh
Ribonuclease J {ECO:0000313|EMBL:EPH06386.1}; TaxID=1203571 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium sp. HGH0353.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.8
  • Coverage: 456.0
  • Bit_score: 888
  • Evalue 5.60e-255

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Taxonomy

Propionibacterium sp. HGH0353 → Propionibacterium → Propionibacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1371
AAGCTCACCCTTGCCCTGGTGGAGGCCAAGCTCAAGGAGCACCGCATCCGCAACTACGACCTGCGCGTGGTGCGTGAGGGCGACGCCGCCGAGATCGGCGAGGAGTTCGACGTCGAGTTCGTCGCCGTCAACCACTCCATCCCCGACGCGCTGGCCGTCTACGTCAAGACCGACGCCGGGTCGATCCTCAACACCGGCGACTTCAAGATGGACCAGCTGCCCATCGACGGGCGGATCACCGACCTGCGGGCCTTCGCCCGGCTCGGTGAGGAGGGTGTCGACGTCTTCATGGTCGACTCCACCAACGCCGAGGTGCCCGGGTTCGTGCGTTCCGAGCGTGACCTCGCCCCGGCCATCGAGCAGACCTTCGACCAGGCCACCCAGAAACTCATCGTTGCCACCTTCGCCTCACACGTCCACCGCGTCCAGCAGGCGGTCGACGCCGCCGTGCGGCACGGTCGCAAGATCTGCTACGTCGGGCGTTCCATGGTGCGCAACATGGCGATCGCCCGCGACCTGGGCTACCTCAAGGTGCCCGACGACTCACTCATCGAATTGCGTGATCTCGACAAGTACCCCGACGACAAGGTCGCCATCATCTGCACCGGTTCCCAGGGCGAGCCGCTGTCGGCCCTGGCCCGCATCGCCCACGGTGAGCACCGGGACATCTCGGTGGGGGAGGGTGACGTCGTGCTCATGGCGAGCTCGCTCATCCCCGGTAACGAGAACGCCGTCACCCGCGTCATCAATGGTCTCATGAGCTGCGGTGCCACGGTGGTGCACAAGGGCAATGCGCTGGTTCACGTCTCCGGGCACGCTGCCCAGGGCGAGCTGCTCTACGCCTACAATGTCGTGCGACCGCGCGCCGTCATGCCGATCCACGGCGAGTACCGGCATCTCACGGCGAATGCCCGTATCGCGGTGTCCACCGGTGTGCAGCCCGAGGACGCCATCGTCGTCACCGATGGCGGCGTCGTCGACCTGGACGATGGCCGGGCCAGCGTCGTCGGCAAGGTGGATGCCTCCTACATTCTCGTCGAGGGAACCGGGGTGAGCGAACTCACCCCCGATGCCCTGGCCGATCGCAAGATTCTCGGTGAGGAGGGGTTCATCTCGGTGTCGGCCGCCATCAACCCCAAGAGCGCGAGTATCGTGTCGGGGCCAGACATCAAGGCCAAGGGATTCGCCGAGGACGATCGTGGCTACGACGAGATCCGCGACCGACTCGTGAGCGAGTTGGAGGCGGCGATGCGCGGCGGCATGAGCGACCAGCACAAACTCCAGCAGGTTGCCCGACGCACCATCGGGCGCTGGGTGGCGCAGACCTACCGACGTCGTCCCATGATCGTGCCGACCATCATCGTCGTGTGA
PROTEIN sequence
Length: 457
KLTLALVEAKLKEHRIRNYDLRVVREGDAAEIGEEFDVEFVAVNHSIPDALAVYVKTDAGSILNTGDFKMDQLPIDGRITDLRAFARLGEEGVDVFMVDSTNAEVPGFVRSERDLAPAIEQTFDQATQKLIVATFASHVHRVQQAVDAAVRHGRKICYVGRSMVRNMAIARDLGYLKVPDDSLIELRDLDKYPDDKVAIICTGSQGEPLSALARIAHGEHRDISVGEGDVVLMASSLIPGNENAVTRVINGLMSCGATVVHKGNALVHVSGHAAQGELLYAYNVVRPRAVMPIHGEYRHLTANARIAVSTGVQPEDAIVVTDGGVVDLDDGRASVVGKVDASYILVEGTGVSELTPDALADRKILGEEGFISVSAAINPKSASIVSGPDIKAKGFAEDDRGYDEIRDRLVSELEAAMRGGMSDQHKLQQVARRTIGRWVAQTYRRRPMIVPTIIVV*