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NECEvent2014_5_3_scaffold_3029_2

Organism: NECEvent2014_5_3_Propionibacterium_HGH0353-rel_63_9

near complete RP 51 / 55 MC: 7 BSCG 48 / 51 ASCG 13 / 38 MC: 1
Location: 1242..1844

Top 3 Functional Annotations

Value Algorithm Source
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS0 similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 200.0
  • Bit_score: 431
  • Evalue 4.80e-118
Peptide deformylase n=1 Tax=Propionibacterium avidum ATCC 25577 RepID=G4CUE4_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 200.0
  • Bit_score: 431
  • Evalue 3.40e-118
  • rbh
peptide deformylase similarity KEGG
DB: KEGG
  • Identity: 97.5
  • Coverage: 200.0
  • Bit_score: 421
  • Evalue 1.30e-115

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Taxonomy

Propionibacterium avidum → Propionibacterium → Propionibacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 603
ATGCGCAAGCACACCCCCAATGACGACCCCCGTTGGGAGGATCTGTTCAAAGGTGGGTCCCTGCGCCGGGTCACCCGGTGGGGGGAGCCTGTTCTCCACGCCCAGACCCGCCCCGTCACCGAGTTCAACGAGGACCTGACGAACCTCATTCGTGACATGTTCACCACCATGGACGCCGCCGACGGTGTGGGTCTGGCCGCAACCCAGGTGGGGGTTGACCTGTCTCTGTTCGTCTACATCTGCCCGGACGCCGACAACATCGTCCACCATGGTGCCTTCTGCAACCCGGTCGTCACCCTGCCGGAGGGACGCGATCGCCGCCTCGAGGCGGCTGACGAAGGCTGCCTCTCCTGGCCCGGCGGATTCCAGTCCCTGGCCCGCCCCGACCTGGCCACCTGCACGGGCCAGGATCCCTGGGGCAACGACATCACCGTCACCGGAACCGGTTTCTTCGCCCGCTGTCTGCAGCACGAGACCGACCACTGCAACGGAGTCGTCTTCGGGGACCGGCTCTCCAAGCGTTCACGTCGCAAGCTCGACGAGCAGCACGACAAGGTGGCCCATCTCTACCCCGACGACTGGCCGCTCACCCCGAAGGGCTGA
PROTEIN sequence
Length: 201
MRKHTPNDDPRWEDLFKGGSLRRVTRWGEPVLHAQTRPVTEFNEDLTNLIRDMFTTMDAADGVGLAATQVGVDLSLFVYICPDADNIVHHGAFCNPVVTLPEGRDRRLEAADEGCLSWPGGFQSLARPDLATCTGQDPWGNDITVTGTGFFARCLQHETDHCNGVVFGDRLSKRSRRKLDEQHDKVAHLYPDDWPLTPKG*